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Record W4400968075 · doi:10.3201/eid3008.240225

Wastewater Surveillance to Confirm Differences in Influenza A Infection between Michigan, USA, and Ontario, Canada, September 2022–March 2023

2024· article· en· W4400968075 on OpenAlexafffundabout
Ryland Corchis-Scott, Mackenzie Beach, Qiudi Geng, Ana Podadera, Owen Corchis-Scott, John Norton, Andrea Büsch, Russell A. Faust, Stacey McFarlane, Scott Withington, Bridget R. Irwin, Mehdi Aloosh, Kenneth Ng, R. Michael L. McKay

Bibliographic record

VenueEmerging infectious diseases · 2024
Typearticle
Languageen
FieldMedicine
TopicRespiratory viral infections research
Canadian institutionsMcMaster UniversityUniversity of Windsor
FundersGovernment of CanadaMinistry of EnvironmentOntario GenomicsCanadian Bee Research Fund
KeywordsWindsorWastewaterEnvironmental healthInfluenza A virusGeographyMedicineVirologyEnvironmental engineeringBiologyEnvironmental scienceVirusEcology

Abstract

fetched live from OpenAlex

RESEARCHT he SARS-CoV-2 pandemic reasserted the impor- tance of epidemic preparedness and surveillance systems for infectious diseases (1).Informed responses to public health challenges require that data be available to decision-makers in a timely manner for early interventions (1).However, traditional clinical based measures of disease incidence have limited use in providing early warnings.Relying on influenzalike illness data is problematic because of difficulty distinguishing between infections ascribed to influenza A virus (IAV), influenza B virus, SARS-CoV-2, or respiratory syncytial virus (2).Virologic surveillance enables respiratory illness to be classified on the basis of etiologic agent.However, results are often slow, and interpretation must account for factors such as test-seeking behavior, accessibility of healthcare services, severity of infection, diagnostic practices of healthcare providers, and hospital protocols.In addition, laboratory capacity may be exceeded, and testing is expensive (3,4).Wastewater surveillance (WS) is shown to be a practical approach for disease surveillance at various spatial scales, offering effectiveness and economic advantage (5,6).WS for SARS-CoV-2 relies on quantifying viral RNA shed in feces and has substantially increased in use since its implementation to track infections during the COVID-19 pandemic.Studies have found the concentration of SARS-CoV-2 RNA in municipal sewage covaries with the levels of disease circulating within the community served and can predict trends in clinical cases and hospitalizations (7,8).In addition, WS has the potential to be rapid; sample Wastewater Surveillance to Confirm Differences in Influenza AInfection between Michigan, USA, and Ontario, Canada,

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.119
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.328
Teacher spread0.298 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes3
Has abstractyes

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