MétaCan
Menu
← Back to cohort
Record W4401169715 · doi:10.1101/2024.07.30.605923

Loss of <i>RREB1</i> reduces adipogenesis and improves insulin sensitivity in mouse and human adipocytes

2024· preprint· en· W4401169715 on OpenAlexaff
Grace Z. Yu, Nicole A. J. Krentz, Liz Bentley, Meng Zhao, Keanu Paphiti, Han Sun, Julius Honecker, Marcus Nygård, Hesam Dashti, Ying Bai, Madeleine Reid, Swaraj Thaman, Martin Wabitsch, Varsha Rajesh, Jing Yang, Katia K. Mattis, Fernando Abaitua, Ramón Casero, H. Hauner, Joshua W. Knowles, Joy Y. Wu, Susanne Mandrup, Melina Claussnitzer, Katrin J. Svensson, Roger Cox, Anna L. Gloyn

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsUniversity of British Columbia
FundersStanford Maternal and Child Health Research InstituteNational Institute of Arthritis and Musculoskeletal and Skin DiseasesNational Institutes of HealthWellcome TrustStanford Diabetes Research CenterMedical Research CouncilAmerican Diabetes AssociationAmerican Heart AssociationINFRAFRONTIERUK Research and Innovation
KeywordsAdipogenesisInsulin sensitivitySensitivity (control systems)Internal medicineEndocrinologyInsulinInsulin resistanceBiologyAdipose tissueMedicineElectronic engineeringEngineering

Abstract

fetched live from OpenAlex

Abstract There are multiple independent genetic signals at the Ras-responsive element binding protein 1 ( RREB1 ) locus associated with type 2 diabetes risk, fasting glucose, ectopic fat, height, and bone mineral density. We have previously shown that loss of RREB1 in pancreatic beta cells reduces insulin content and impairs islet cell development and function. However, RREB1 is a widely expressed transcription factor and the metabolic impact of RREB1 loss in vivo remains unknown. Here, we show that male and female global heterozygous knockout ( Rreb1 +/- ) mice have reduced body length, weight, and fat mass on high-fat diet. Rreb1 +/- mice have sex- and diet-specific decreases in adipose tissue and adipocyte size; male mice on high-fat diet had larger gonadal adipocytes, while males on standard chow and females on high-fat diet had smaller, more insulin sensitive subcutaneous adipocytes. Mouse and human precursor cells lacking RREB1 have decreased adipogenic gene expression and activated transcription of genes associated with osteoblast differentiation, which was associated with Rreb1 +/- mice having increased bone mineral density in vivo . Finally, human carriers of RREB1 T2D protective alleles have smaller adipocytes, consistent with RREB1 loss-of-function reducing diabetes risk.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.243
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicAdipose Tissue and Metabolism→French-language works237,207→