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Record W4401339987 · doi:10.1038/s41588-024-01835-2

The Ruminant Telomere-to-Telomere (RT2T) Consortium

2024· review· en· W4401339987 on OpenAlexaff
Ted Kalbfleisch, Stephanie McKay, Brenda M. Murdoch, David L. Adelson, Diego Almansa-Villa, Gabrielle M. Becker, Linda M. Beckett, María José Benítez-Galeano, Fernando H. Biase, Theresa Casey, Edward B. Chuong, Emily L. Clark, Shannon Clarke, Noelle E. Cockett, Christine Couldrey, Brian W. Davis, Christine G. Elsik, Thomas Faraut, Yahui Gao, Carine Genêt, Patrick G. S. Grady, Jonathan A. Green, Richard Green, Dailu Guan, Darren E. Hagen, Gabrielle A. Hartley, Michael P. Heaton, Savannah J. Hoyt, Wen Huang, Erich D. Jarvis, Jenna Kalleberg, Hasan Khatib, Klaus-Peter Koepfi, James E. Koltes, Sergey Koren, Christa Kuehn, Tosso Leeb, Alexander S. Leonard, George E. Liu, Wai Yee Low, Hunter L McConnell, Kathryn M. McRae, Karen H. Miga, Michelle R. Mousel, Holly L. Neibergs, Temitayo Olagunju, Matt Pennell, Bruna Petry, Mirjam Pewsner, Adam M. Phillippy, Brandon D. Pickett, Paulene Pineda, Tamara Potapova, Satyanarayana Rachagani, Arang Rhie, Monique Rijnkels, Annie Robic, Nélida Rodríguez‐Osorio, Yana Safonova, Gustavo Pimenta Schettini, Robert D. Schnabel, Nagabhishek Sirpu Natesh, Morgan R Stegemiller, Jessica M. Storer, Paul Stothard, Caleb Stull, Gwenola Tosser‐Klopp, Germán M. Traglia, Christopher K. Tuggle, Curtis P. Van Tassell, Corey T. Watson, Rosemarie Weikard, Klaus Wimmers, Shuang Xie, Liu Yang, Timothy P. L. Smith, Rachel J. O’Neill, Benjamin D. Rosen

Bibliographic record

VenueNature Genetics · 2024
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMolecular Biology Techniques and Applications
Canadian institutionsUniversity of Alberta
FundersAgricultural Research ServiceNational Institute of Food and AgricultureOxford Nanopore TechnologiesBiotechnology and Biological Sciences Research CouncilU.S. Department of Agriculture
KeywordsTelomereBiologyGeneticsTelomere-binding proteinRuminantComputational biologyDNADNA-binding proteinGeneEcologyTranscription factor

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.850
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.350
Teacher spread0.337 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations30
Published2024
Admission routes1
Has abstractno

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