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Record W4402217758 · doi:10.1073/pnas.2321794121

Inherited human RelB deficiency impairs innate and adaptive immunity to infection

2024· article· en· W4402217758 on OpenAlexafffund
Tom Le Voyer, Majistor Raj Luxman Maglorius Renkilaraj, Kunihiko Moriya, Malena Pérez Lorenzo, Tina Nguyen, Liwei Gao, Tamar Rubin, Axel Cederholm, Masato Ogishi, Carlos A. Arango-Franco, Vivien Béziat, Romain Lévy, Mélanie Migaud, Franck Rapaport, Yuval Itan, Elissa K. Deenick, Irene Cortese, Andrea Lisco, Kaan Boztuǧ, Laurent Abel, Stéphanie Boisson‐Dupuis, Bertrand Boisson, Patrick Frosk, S. Cindy, Nils Landegren, Fatih Çelmeli, Jean‐Laurent Casanova, Stuart G. Tangye, Anne Puel

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNF-κB Signaling Pathways
Canadian institutionsUniversity of Manitoba
FundersNational Institute of Neurological Disorders and StrokeFaculty of Medicine and Health, University of SydneyNational Center for Advancing Translational SciencesMedical Research CouncilNational Cancer InstituteHORIZON EUROPE Framework ProgrammeNational Institutes of HealthNew South Wales GovernmentHonjo International Scholarship FoundationUniversidad de AntioquiaEuropean Society for ImmunodeficienciesHospital for Sick ChildrenStavros Niarchos FoundationEuropean CommissionAssistance Publique - Hôpitaux de ParisMedizinische Universität WienUniversity of New South WalesNational Health and Medical Research CouncilCancer Research InstituteLastentautien TutkimussäätiöInstitut des maladies génétiques ImagineNational Institute of Allergy and Infectious DiseasesAgence Nationale de la RechercheAustralian GovernmentInstitut National de la Santé et de la Recherche MédicaleDepartment of Health and Aged Care, Australian GovernmentDivision of Intramural Research, National Institute of Allergy and Infectious DiseasesFondation du SouffleScience for Life LaboratoryRockefeller UniversityÖsterreichischen Akademie der WissenschaftenUppsala UniversitetSt. Giles FoundationFulbright U.S. Scholar ProgramFondation pour la Recherche MédicaleUniversität WienHoward Hughes Medical Institute
KeywordsRELBBiologyImmunologyImmunoglobulin class switchingAntibodyB cellCancer researchVirologyNFKB1Transcription factorGenetics

Abstract

fetched live from OpenAlex

We report two unrelated adults with homozygous (P1) or compound heterozygous (P2) private loss-of-function variants of V-Rel Reticuloendotheliosis Viral Oncogene Homolog B ( RELB). The resulting deficiency of functional RelB impairs the induction of NFKB2 mRNA and NF-κB2 (p100/p52) protein by lymphotoxin in the fibroblasts of the patients. These defects are rescued by transduction with wild-type RELB complementary DNA (cDNA). By contrast, the response of RelB-deficient fibroblasts to Tumor Necrosis Factor (TNF) or IL-1β via the canonical NF-κB pathway remains intact. P1 and P2 have low proportions of naïve CD4 + and CD8 + T cells and of memory B cells. Moreover, their naïve B cells cannot differentiate into immunoglobulin G (IgG)- or immunoglobulin A (IgA)-secreting cells in response to CD40L/IL-21, and the development of IL-17A/F-producing T cells is strongly impaired in vitro. Finally, the patients produce neutralizing autoantibodies against type I interferons (IFNs), even after hematopoietic stem cell transplantation, attesting to a persistent dysfunction of thymic epithelial cells in T cell selection and central tolerance to some autoantigens. Thus, inherited human RelB deficiency disrupts the alternative NF-κB pathway, underlying a T- and B cell immunodeficiency, which, together with neutralizing autoantibodies against type I IFNs, confers a predisposition to viral, bacterial, and fungal infections.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.050
Threshold uncertainty score0.204

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.317
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2024
Admission routes2
Has abstractyes

Explore more

Same venueProceedings of the National Academy of SciencesSame topicNF-κB Signaling PathwaysFrench-language works237,207