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Abstract B008: Decoding the primary site-specific regulation of rhabdomyosarcoma metastasis

2024· article· en· W4402266847 on OpenAlexaboutno aff
Katie E. Hebron, Kristine A. Isanogle, Elijah F. Edmondson, Amy James, Simone Difilippantonio, Marielle E. Yohe

Bibliographic record

VenueCancer Research · 2024
Typearticle
Languageen
FieldMedicine
TopicSarcoma Diagnosis and Treatment
Canadian institutionsnot available
Fundersnot available
KeywordsRhabdomyosarcomaMedicineMetastasisDecoding methodsOncologyCancer researchInternal medicineCancerSarcomaPathologyComputer scienceAlgorithm

Abstract

fetched live from OpenAlex

Abstract The prognosis for patients with high-risk rhabdomyosarcoma (RMS), a pediatric sarcoma characterized in part by defective skeletal muscle (myogenic) differentiation, has remained stagnant at <30% for over forty years. With >15% of patients presenting at diagnosis with metastasis, a defining factor of high-risk disease, there is an urgent need for new therapies. Some primary tumor locations are associated with a higher incidence of metastasis and poorer outcomes. However, the biology (and potential for therapeutic intervention) driving this prognostic factor is poorly defined.To analyze the influence of the primary tumor location on RMS invasion and metastasis, we evaluated cell line xenografts (CDX) implanted in a favorable site, the tongue, versus an unfavorable site, the hindlimb. We evaluated invasion and metastasis from each primary tumor site by histopathology and measured gene expression changes by bulk RNAseq.Despite the tongue being deemed a favorable primary site, perineural invasion or intravascular tumor emboli (60% versus 0%), sentinel lymph node metastasis (25-100% versus 0%), and clinically significant lung metastases (>10% lung area or symptomatic mice; 20% versus 0%) were observed more frequently in tongue xenograft-bearing mice than hindlimb xenograft-bearing mice. The expression of myogenic differentiation markers is higher in tongue CDX than in hindlimb CDX, but expression of these markers is reduced upon metastasis. These phenotypes are maintained when cells are returned to 2D culture, suggesting a stable shift in the differentiation state. Interestingly, CDX of sentinel lymph node metastasis-derived cells were more invasive and metastatic than parental CDX when implanted in the tongue, but not when implanted in the hindlimb.Our work, the first direct evaluation of RMS invasion and metastasis by primary tumor location, demonstrates that the primary tumor location influences RMS metastasis and that tumor cell-intrinsic properties alone are insufficient to increase invasion and metastasis. Ongoing work aims to identify the mechanisms by which the primary tumor microenvironment regulates invasion, enhancing our understanding of the biology of RMS metastasis and offering an opportunity to employ a precision medicine-based approach to targeting metastasis. Citation Format: Katie E. Hebron, Kristine Isanogle, Elijah F. Edmondson, Amy James, Simone Difilippantonio, Marielle E. Yohe. Decoding the primary site-specific regulation of rhabdomyosarcoma metastasis [abstract]. In: Proceedings of the AACR Special Conference in Cancer Research: Advances in Pediatric Cancer Research; 2024 Sep 5-8; Toronto, Ontario, Canada. Philadelphia (PA): AACR; Cancer Res 2024;84(17 Suppl):Abstract nr B008.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.142
GPT teacher head0.419
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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