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Record W4402708427 · doi:10.1016/j.dcn.2024.101452

Quantifying brain development in the HEALthy Brain and Child Development (HBCD) Study: The magnetic resonance imaging and spectroscopy protocol

2024· article· en· W4402708427 on OpenAlexaff
Douglas Dean, M. Dylan Tisdall, Jessica L. Wisnowski, Eric Feczko, Borjan Gagoski, Andrew L. Alexander, Richard A.E. Edden, Wei Gao, Timothy Hendrickson, Brittany Howell, Hao Huang, Kathryn L. Humphreys, Tracy Riggins, Chad M. Sylvester, Kimberly B. Weldon, Essa Yacoub, Banu Ahtam, Natacha Beck, Suchandrima Banerjee, Sergiy Boroday, Arvind Caprihan, B. Caron, Samuel Carpenter, Yulin V. Chang, Ai Wern Chung, Matthew Cieslak, William T. Clarke, Anders M. Dale, Samir Das, Christopher W. Davies‐Jenkins, Alexander J. Dufford, Alan C. Evans, Laetitia Fesselier, Sandeep Ganji, Guillaume Gilbert, Alice M. Graham, Aaron T. Gudmundson, Maren Macgregor-Hannah, Michael P. Harms, Tom Hilbert, Steve C. N. Hui, M. Okan İrfanoğlu, Steven Kecskemeti, Tobias Kober, Joshua Kuperman, Bidhan Lamichhane, Bennett A. Landman, Xavier Lecour-Bourcher, Erik Lee, Xu Li, Leigh MacIntyre, Cécile Madjar, Mary Kate Manhard, Andrew R. Mayer, Kahini Mehta, Lucille A. Moore, Saipavitra Murali‐Manohar, Cristian Navarro, Mary Beth Nebel, Sharlene D. Newman, Allen T. Newton, Ralph Noeske, Elizabeth S. Norton, Georg Oeltzschner, Regis Ongaro-Carcy, Xiawei Ou, Minhui Ouyang, Todd B. Parrish, James J. Pekar, Thomas Pengo, Carlo Pierpaoli, Russell A. Poldrack, Vidya Rajagopalan, Dan Rettmann, Pierre Rioux, Jens T. Rosenberg, Taylor Salo, Theodore D Satterthwaite, Lisa S. Scott, Gizeaddis Simegn, W. Kyle Simmons, Yulu Song, Barry J Tikalsky, Jean A. Tkach, Peter C.M. van Zijl, Jennifer Vannest, Maarten J. Versluis, Yansong Zhao, Helge J. Zöllner, Damien A. Fair, Christopher D. Smyser, Jed T. Elison

Bibliographic record

VenueDevelopmental Cognitive Neuroscience · 2024
Typearticle
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsCARE CanadaMontreal Neurological Institute and Hospital
FundersNational Center for Advancing Translational SciencesNational Institute of Biomedical Imaging and BioengineeringNational Institutes of HealthNational Cancer InstituteEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Institute on Drug AbuseNational Institute of Mental HealthNational Institute on Aging
KeywordsPsychologyMagnetic resonance imagingBrain developmentFunctional magnetic resonance imagingNuclear magnetic resonance spectroscopyNeuroscienceProtocol (science)Nuclear magnetic resonanceChemistryMedicineStereochemistry

Abstract

fetched live from OpenAlex

The HEALthy Brain and Child Development (HBCD) Study, a multi-site prospective longitudinal cohort study, will examine human brain, cognitive, behavioral, social, and emotional development beginning prenatally and planned through early childhood. The acquisition of multimodal magnetic resonance-based brain development data is central to the study's core protocol. However, application of Magnetic Resonance Imaging (MRI) methods in this population is complicated by technical challenges and difficulties of imaging in early life. Overcoming these challenges requires an innovative and harmonized approach, combining age-appropriate acquisition protocols together with specialized pediatric neuroimaging strategies. The HBCD MRI Working Group aimed to establish a core acquisition protocol for all 27 HBCD Study recruitment sites to measure brain structure, function, microstructure, and metabolites. Acquisition parameters of individual modalities have been matched across MRI scanner platforms for harmonized acquisitions and state-of-the-art technologies are employed to enable faster and motion-robust imaging. Here, we provide an overview of the HBCD MRI protocol, including decisions of individual modalities and preliminary data. The result will be an unparalleled resource for examining early neurodevelopment which enables the larger scientific community to assess normative trajectories from birth through childhood and to examine the genetic, biological, and environmental factors that help shape the developing brain.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.012
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Protocol · Consensus signal: Protocol
Teacher disagreement score0.012
Threshold uncertainty score0.065

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0120.014
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0020.002
Scholarly communication0.0020.001
Open science0.0030.003
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0100.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.049
GPT teacher head0.388
Teacher spread0.339 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2024
Admission routes1
Has abstractyes

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