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Record W4402956171 · doi:10.5376/mgg.2024.15.0016

Chloroplast Genome Studies in <i>Zea</i>: Insights into Maize Domestication

2024· article· en· W4402956171 on OpenAlexvenueno aff
Jiansheng Li

Bibliographic record

VenueMaize Genomics and Genetics · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Mapping and Diversity in Plants and Animals
Canadian institutionsnot available
Fundersnot available
KeywordsDomesticationGenomeChloroplastZea maysBiologyGeneticsAgronomyGene

Abstract

fetched live from OpenAlex

This study aims to synthesize current knowledge on the chloroplast genome of Zea genus , with a focus on its significance in understanding maize domestication. By examining the structure, function, and comparative genomics of the chloroplast genome, we elucidate the genetic and evolutionary mechanisms underlying the transition from wild teosinte to cultivated maize. Key findings from chloroplast genome studies reveal that maize originated in the Balsas River Valley, highlighting the genetic diversity within the genus Zea  and the evolutionary relationships among maize varieties. Chloroplast DNA analysis uncovers patterns of gene flow, hybridization, and introgression, which contribute to the genetic richness of maize. Positive selection on chloroplast genes associated with photosynthesis and stress response underscores the adaptive changes during domestication. Additionally, advancements in genomic technologies and bioinformatics have enhanced the resolution and accuracy of chloroplast genome assembly and analysis. Chloroplast genome studies provide crucial insights into the genetic and evolutionary dynamics of maize domestication. The integration of chloroplast and nuclear genome data offers a comprehensive understanding of the selective pressures and adaptations that have shaped modern maize. These findings have significant implications for maize breeding, conservation, and global food security, emphasizing the importance of continued research and collaboration in the field of chloroplast genomics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.975
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.248
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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