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Record W4403119128 · doi:10.1101/2024.10.03.24314850

Evidence for Maternal Autoantibodies in the Pathogenesis of Preterm Birth

2024· preprint· en· W4403119128 on OpenAlexaff
Elze Rackaityte, Beltran Borges, Hannah Kortbawi, Haleigh S. Miller, Shirley Shao, Kelsey C. Zorn, Frank McCarthy, Joseph S. Creery, Margareta Mayer, Elaine Kouame, Scott P. Oltman, Andrew F. Kung, Sabrina A Mann, Anthea Mitchell, Gabrielle Rizzuto, Rebecca J. Baer, Caleigh Mandel‐Brehm, Kelli K. Ryckman, Stephanie L. Gaw, Sara Hillman, Laura L. Jelliffe‐Pawlowski, Joanna Halkias, Nasim C. Sobhani, Joshua E. Elias, Tippi C. MacKenzie, Joseph L. DeRisi

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldImmunology and Microbiology
TopicReproductive System and Pregnancy
Canadian institutionsUniversity Hospital Foundation
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentSandler FoundationNational Institute of Child Health and Human DevelopmentNational Institute of Allergy and Infectious DiseasesCore Research for Evolutional Science and TechnologyUniversity of California, San Francisco
KeywordsAutoantibodyMedicinePreterm deliveryImmunologyPregnancyObstetricsAntibodyFetusBiologyGenetics

Abstract

fetched live from OpenAlex

SUMMARY Complications from preterm birth are the leading cause of global mortality in children under age five 1,2 . Spontaneous preterm labor is the most common cause of preterm delivery and is associated with a breakdown of maternal-fetal tolerance 3–5 . However, the current understanding of the role of autoantibodies in this process has been limited to a handful of examples of pathogenic antibodies that occur with pregnancy complications 6–14 . Here, we employ proteome-wide autoantibody profiling via phage display immunoprecipitation and sequencing (PhIP-seq) to identify autoreactivities associated with pregnancy as well as term or preterm delivery outcomes in maternal sera across eight cohorts of human pregnancy (n=2,194). We find that preterm pregnancies exhibit greater proteome-wide autoreactivity, validated by placental proteome immunoprecipitation mass spectrometry analysis using patient sera. Within the preterm birth associated autoreactive signature, we find enrichment for pathways known to be critical for normal pregnancy outcomes, including vascular development, reproductive hormones, and regulators of inflammation. Further analysis of autoreactive targets revealed involvement of the IL1β inflammatory cytokine cascade. IL1β is one of the few inflammatory cytokines sufficient to rapidly induce labor in animals 15–24 and it is also elevated in preterm human pregnancies 25–29 . Across these eight cohorts, antibodies to cytokine IL1 receptor antagonist (IL1RA), a natural antagonist to IL1β are significantly enriched in roughly 7% of preterm pregnancies. Sera from these patients functionally neutralize IL1RA activity in vitro and anti-IL1RA induces greater resorption, inflammation, and vascular malperfusion in timed-pregnant mice in vivo . These findings suggest utility for serologic diagnostics as one approach to stratify risk of spontaneous preterm delivery in addition to interventional strategies for restoring control of IL1β during pregnancy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.068
GPT teacher head0.317
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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