MétaCan
Menu
Back to cohort
Record W4403508643 · doi:10.1107/s2052520624008679

The seventh blind test of crystal structure prediction: structure ranking methods

2024· article· en· W4403508643 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueActa Crystallographica Section B Structural Science Crystal Engineering and Materials · 2024
Typearticle
Languageen
FieldMaterials Science
TopicX-ray Diffraction in Crystallography
Canadian institutionsDalhousie University
FundersArmy Research LaboratoryArmy Research OfficeDivision of ChemistryDivision of Materials ResearchJapan Society for the Promotion of ScienceHrvatska Zaklada za ZnanostScience and Technology Facilities CouncilResearch Institute for Information Technology, Kyushu UniversityNatural Sciences and Engineering Research Council of CanadaArgonne National LaboratoryOak Ridge Institute for Science and EducationOffice of ScienceBill and Carol Fox Center for Humanistic Inquiry, Emory UniversityFundación para el Fomento en Asturias de la Investigación Científica Aplicada y la TecnologíaRussian Science FoundationUniversity of SouthamptonWorkforce Development for Teachers and ScientistsGrantová Agentura České RepublikyXtalPiKhalifa University of Science, Technology and ResearchDell EMCKarl-Franzens-Universität GrazDeutsche ForschungsgemeinschaftEngineering and Physical Sciences Research CouncilAgencia Estatal de InvestigaciónOak Ridge Associated UniversitiesEli Lilly and CompanyU.S. Department of EnergyEuropean CommissionUniversity of ReadingNational Science Foundation
KeywordsRanking (information retrieval)Crystal structure predictionTest (biology)Artificial intelligenceComputer scienceCrystal structureStatisticsMathematicsCrystallographyGeologyChemistry

Abstract

fetched live from OpenAlex

A seventh blind test of crystal structure prediction has been organized by the Cambridge Crystallographic Data Centre. The results are presented in two parts, with this second part focusing on methods for ranking crystal structures in order of stability. The exercise involved standardized sets of structures seeded from a range of structure generation methods. Participants from 22 groups applied several periodic DFT-D methods, machine learned potentials, force fields derived from empirical data or quantum chemical calculations, and various combinations of the above. In addition, one non-energy-based scoring function was used. Results showed that periodic DFT-D methods overall agreed with experimental data within expected error margins, while one machine learned model, applying system-specific AIMnet potentials, agreed with experiment in many cases demonstrating promise as an efficient alternative to DFT-based methods. For target XXXII, a consensus was reached across periodic DFT methods, with consistently high predicted energies of experimental forms relative to the global minimum (above 4 kJ mol −1 at both low and ambient temperatures) suggesting a more stable polymorph is likely not yet observed. The calculation of free energies at ambient temperatures offered improvement of predictions only in some cases (for targets XXVII and XXXI). Several avenues for future research have been suggested, highlighting the need for greater efficiency considering the vast amounts of resources utilized in many cases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Scholarly communication
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.112
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.002
Science and technology studies0.0010.002
Scholarly communication0.0020.002
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.262
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it