MétaCan
Menu
Back to cohort
Record W4403833980 · doi:10.1681/asn.202403tyhadx

Chronic Benign TubularProteinuria from Compound Heterozygous Mutations in CUBN: A Case Report

2024· article· en· W4403833980 on OpenAlexaff
Adam Pietrobon, Mark Elliott

Bibliographic record

VenueJournal of the American Society of Nephrology · 2024
Typearticle
Languageen
FieldMedicine
TopicPeptidase Inhibition and Analysis
Canadian institutionsUniversity of British ColumbiaProvidence Health Care
Fundersnot available
KeywordsCompound heterozygosityMedicineMutationInternal medicineGeneticsBiologyGene

Abstract

fetched live from OpenAlex

Introduction: Proteinuria is a commonly used parameter for predicting decline in renal filtration function. Cubilin, encoded by CUBN, is a critical protein involved in low molecular weight protein reabsorption in the proximal tubule. Mutations in CUBN lead to Imerslund-Gräsbeck syndrome (IGS), a disorder characterized by vitamin B12 deficiency (and consequences related to that) with or without proteinuria. Recent evidence suggests that C-terminal mutations in CUBN may lead to proteinuria without other features of IGS. Case Description: We report a case of a 47 year-old male with chronic, albumin-predominant, subnephrotic range proteinuria since his teenage years, but preserved eGFR. Neither ACE inhibition nor AT-II receptor blockade reduced his degree of proteinuria. Genetic testing identified three distinct pathogenic mutations in CUBN that were confirmed by parental cascade testing to be compound heterozygosity. All mutations were downstream of the vitamin B12-intrinsic factor binding domain of cubilin, two of which conferred stop-gain sequences. The patient had normal vitamin B12 levels and did not exhibit megaloblastic anemia, growth retardation, or any other features of IGS. Renal biopsy was not pursued for this patient as diagnostic clarification was achieved by non-invasive genetic testing alone. Discussion: This case report presents the first long-term follow-up of a patient with CUBN mutations, demonstrating eGFR stability despite chronic proteinuria. We highlight several important lessons. First, not all proteinuria is made equal, and forms of tubular proteinuria can exist without compromising renal filtration function. Second, identifying genetic forms of tubular proteinuria is key to avoiding ineffective interventions (e.g. ACE inhibition, AT-II receptor blockade) and unnecessary invasive procedures (e.g. renal biopsy). Third, the location of CUBN mutations dictate phenotypic consequences, with C-terminal mutations leading to proteinuria without vitamin B12 deficiency.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0040.002
Science and technology studies0.0030.002
Scholarly communication0.0020.002
Open science0.0020.003
Research integrity0.0060.003
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.303
Teacher spread0.287 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the American Society of NephrologySame topicPeptidase Inhibition and AnalysisFrench-language works237,207