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Record W4403930856 · doi:10.1016/j.bcab.2024.103427

Biotic stress alleviation: A sneak peek into the beneficial taxa in rhizosphere

2024· article· en· W4403930856 on OpenAlexaff
Oghoye Priscilla Oyedoh, Anjana J. Atapattu, Jing Ge, Gustavo Santoyo, Bernard R. Glick, Olubukola Oluranti Babalola

Bibliographic record

VenueBiocatalysis and Agricultural Biotechnology · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsUniversity of Waterloo
FundersNational Research Foundation
KeywordsRhizosphereTaxonBiotic stressBiologyStress (linguistics)EcologyBotanyAbiotic stressPaleontologyBacteria

Abstract

fetched live from OpenAlex

Biotic stress is a known cause of considerable agricultural loss, and reducing this loss is crucial for enhancing crop productivity and achieving global food security. Although plants are sessile, they have well-equipped beneficial microbial neighbors in the rhizosphere that can be shaped and recruited to meet their needs, especially during periods of stress. Multiple factors stimulate shifts within beneficial microbes, especially the most malleable bacterial groups, to favour their host, and numerous studies have revealed how biotic stress strongly alters the rhizosphere taxa of plants to predominantly Proteobacteria, Firmicutes and Actinomycetes. To this end, the Actinomycetes-members of these bacterial taxa have been applied as beneficial bioinoculants to control diseases in plants with a dearth utilization of their metabolites (including antibiotics) as chemo-control agents against phytopathogens. Therefore, this review examines how biotic stress shapes key bacterial taxa in the rhizosphere and highlights the potential of Actinomycetes-derived antibiotics and other metabolites to mitigate biotic stress through direct antagonism of pathogens as well as inducing plant defense. This chemo-control approach could potentially replace synthetic chemicals in mitigating biotic stress for crop productivity. • Biotic stress alleviation is crucial to achieving food security. • This stress causes a paradigm shift in the rhizosphere microbiome to beneficial taxa that could ensure host resilience. • A member of the taxa is known to be a prolific antibiotic and other metabolite producer for plant sustainability. • These metabolites could be candidate compounds for alleviating biotic stress through chemocontrol.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.517
Threshold uncertainty score0.742

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.201
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes1
Has abstractyes

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