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Record W4403968392 · doi:10.1097/fpc.0000000000000547

The Pharmacogenomics Global Research Network Implementation Working Group: global collaboration to advance pharmacogenetic implementation

2024· article· en· W4403968392 on OpenAlex
Larisa H. Cavallari, J. Kevin Hicks, Jai N. Patel, Amanda L. Elchynski, D. Max Smith, Salma A. Bargal, A. Fleck, Christina L. Aquilante, Shayna R. Killam, Lauren Lemke, Taichi Ochi, Laura B. Ramsey, Cyrine E. Haidar, Nihal El Rouby, Andrew A. Monte, Josiah D. Allen, Amber L. Beitelshees, Jeffrey R. Bishop, Chad Bousman, R. W. F. Campbell, Emily J. Cicali, Kelsey J. Cook, Benjamin Q. Duong, Evangelia Eirini Tsermpini, Sonya Tang Girdwood, David Gregornik, Kristin Grimsrud, Nathan Lamb, James C. Lee, Rocio Ortı́z-López, Tinashe Mazhindu, Sarah Morris, Mohamed Nagy, Jenny Nguyen, Amy L. Pasternak, Natasha Petry, Ron H. N. van Schaik, April Schultz, Todd C. Skaar, Hana Al Alshaykh, James M. Stevenson, Rachael M. Stone, Nam K. Tran, Sony Tuteja, Erica L. Woodahl, L. Yuan, Craig R. Lee

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenuePharmacogenetics and Genomics · 2024
Typearticle
Languageen
FieldPharmacology, Toxicology and Pharmaceutics
TopicPharmacogenetics and Drug Metabolism
Canadian institutionsUniversity of Calgary
FundersNational Institute of General Medical SciencesUniversity of North Carolina at Chapel HillUniversity of California, DavisUniversity of MontanaUniversity of Pennsylvania Health SystemUniversity of Illinois at Urbana-ChampaignNational Institutes of HealthUniverza v LjubljaniRijksuniversiteit GroningenSt. Jude Children's Research HospitalUniversity of MinnesotaUniversity of PennsylvaniaMoffitt Cancer CenterU.S. Department of Veterans Affairs
KeywordsPharmacogeneticsPharmacogenomicsWorkflowDosingDrug responseMedicineDrugComputer sciencePharmacologyBiologyGenotypeGenetics

Abstract

fetched live from OpenAlex

Pharmacogenetics promises to optimize treatment-related outcomes by informing optimal drug selection and dosing based on an individual's genotype in conjunction with other important clinical factors. Despite significant evidence of genetic associations with drug response, pharmacogenetic testing has not been widely implemented into clinical practice. Among the barriers to broad implementation are limited guidance for how to successfully integrate testing into clinical workflows and limited data on outcomes with pharmacogenetic implementation in clinical practice. The Pharmacogenomics Global Research Network Implementation Working Group seeks to engage institutions globally that have implemented pharmacogenetic testing into clinical practice or are in the process or planning stages of implementing testing to collectively disseminate data on implementation strategies, metrics, and health-related outcomes with the use of genotype-guided drug therapy to ultimately help advance pharmacogenetic implementation. This paper describes the goals, structure, and initial projects of the group in addition to implementation priorities across sites and future collaborative opportunities.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.915
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0050.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0030.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.126
GPT teacher head0.546
Teacher spread0.420 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it