MétaCan
Menu
Back to cohort
Record W4403968392 · doi:10.1097/fpc.0000000000000547

The Pharmacogenomics Global Research Network Implementation Working Group: global collaboration to advance pharmacogenetic implementation

2024· article· en· W4403968392 on OpenAlexaff
Larisa H. Cavallari, J. Kevin Hicks, Jai N. Patel, Amanda L. Elchynski, D. Max Smith, Salma A. Bargal, A. Fleck, Christina L. Aquilante, Shayna R. Killam, Lauren Lemke, Taichi Ochi, Laura B. Ramsey, Cyrine E. Haidar, Nihal El Rouby, Andrew A. Monte, Josiah D. Allen, Amber L. Beitelshees, Jeffrey R. Bishop, Chad Bousman, R. W. F. Campbell, Emily J. Cicali, Kelsey J. Cook, Benjamin Q. Duong, Evangelia Eirini Tsermpini, Sonya Tang Girdwood, David Gregornik, Kristin Grimsrud, Nathan Lamb, James C. Lee, Rocio Ortı́z-López, Tinashe Mazhindu, Sarah Morris, Mohamed Nagy, Jenny Nguyen, Amy L. Pasternak, Natasha Petry, Ron H. N. van Schaik, April Schultz, Todd C. Skaar, Hana Al Alshaykh, James M. Stevenson, Rachael M. Stone, Nam K. Tran, Sony Tuteja, Erica L. Woodahl, L. Yuan, Craig R. Lee

Bibliographic record

VenuePharmacogenetics and Genomics · 2024
Typearticle
Languageen
FieldPharmacology, Toxicology and Pharmaceutics
TopicPharmacogenetics and Drug Metabolism
Canadian institutionsUniversity of Calgary
FundersNational Institute of General Medical SciencesUniversity of North Carolina at Chapel HillUniversity of California, DavisUniversity of MontanaUniversity of Pennsylvania Health SystemUniversity of Illinois at Urbana-ChampaignNational Institutes of HealthUniverza v LjubljaniRijksuniversiteit GroningenSt. Jude Children's Research HospitalUniversity of MinnesotaUniversity of PennsylvaniaMoffitt Cancer CenterU.S. Department of Veterans Affairs
KeywordsPharmacogeneticsPharmacogenomicsWorkflowDosingDrug responseMedicineDrugComputer sciencePharmacologyBiologyGenotypeGenetics

Abstract

fetched live from OpenAlex

Pharmacogenetics promises to optimize treatment-related outcomes by informing optimal drug selection and dosing based on an individual's genotype in conjunction with other important clinical factors. Despite significant evidence of genetic associations with drug response, pharmacogenetic testing has not been widely implemented into clinical practice. Among the barriers to broad implementation are limited guidance for how to successfully integrate testing into clinical workflows and limited data on outcomes with pharmacogenetic implementation in clinical practice. The Pharmacogenomics Global Research Network Implementation Working Group seeks to engage institutions globally that have implemented pharmacogenetic testing into clinical practice or are in the process or planning stages of implementing testing to collectively disseminate data on implementation strategies, metrics, and health-related outcomes with the use of genotype-guided drug therapy to ultimately help advance pharmacogenetic implementation. This paper describes the goals, structure, and initial projects of the group in addition to implementation priorities across sites and future collaborative opportunities.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.227
metaresearch head score (Gemma)0.107
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.227
Threshold uncertainty score0.953

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2270.107
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0020.003
Science and technology studies0.0050.004
Scholarly communication0.0120.010
Open science0.0070.039
Research integrity0.0120.016
Insufficient payload (model declined to judge)0.0200.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.126
GPT teacher head0.546
Teacher spread0.420 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations20
Published2024
Admission routes1
Has abstractyes

Explore more

Same venuePharmacogenetics and GenomicsSame topicPharmacogenetics and Drug MetabolismFrench-language works237,207