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Role of hypusine signaling in idiopathic pulmonary fibrosis

2024· article· en· W4404097256 on OpenAlexaff
Sarah‐Eve Lemay, Wenhui Wu, Sandra Martineau, Mélanie Sauvaget, Andréanne Pelletier, Sandra Breuils‐Bonnet, Alice Bourgeois, François Potus, Steeve Provencher, Sébastien Bonnet, Olivier Boucherat

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicInterstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
Canadian institutionsUniversité Laval
Fundersnot available
KeywordsIdiopathic pulmonary fibrosisPulmonary fibrosisSignal transductionMedicineBioinformaticsCancer researchFibrosisCell biologyPathologyInternal medicineBiologyLung

Abstract

fetched live from OpenAlex

Idiopathic pulmonary fibrosis (IPF) is a progressive and fatal disease. Co-morbid pulmonary hypertension (PH) is common in patients with IPF and contributes to a worse clinical prognosis. Exaggerated resistance to apoptosis, enhanced proliferation and excessive extracellular matrix (ECM) deposition are key endophenotypes observed in both lung fibroblasts (LFs) and pulmonary artery smooth muscle cells (PASMCs) from IPF patients resulting in the development and perpetuation of fibrotic scarring and vascular obliteration. Eukaryotic translation initiation factor 5A (eIF5A) is known to facilitate translation of mRNAs with oncogenic proprieties and containing consecutive proline residues. Strikingly, eIF5A is the only protein that contains the post-translational modification hypusine, which is required for its function. Hypusine formation is catalyzed by the sequential actions of Deoxyhypusine synthase (DHPS) and Deoxyhypusine hydroxylase (DOHH). We hypothesized that hypusine signaling is increased in IPF and promotes parenchymal and vascular remodeling. We demonstrated that DHPS, DOHH, total and hypusinated forms of eIF5A are overexpressed in lungs and isolated LFs of IPF patients and animal models (bleomycin (BLM)-treated mice, BLM+MCT-treated rats). We found that pharmacological inhibition of DHPS (GC7) reduced IPF-LF and IPF-PASMC survival and proliferation (Annexin V, Ki67, EdU incorporation), activation (aSMA, FN, COL1) and migratory capacity (scratch-wound and transwell assays). GC7 or genetic deletion of DHPS reduced TGFb1-induced activation of control LFs (Survivin, aSMA and COL1). Inhibition of DHPS improved fibrosis in human IPF-PCLS. Our data show that hypusine signaling may represent a new therapeutic target in IPF.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.246
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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