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Late Breaking Abstract - Multicenter study of bronchial wash-bile acid signature for the diagnosis of aspiration and prediction of chronic lung allograft dysfunction

2024· article· en· W4404104498 on OpenAlexaff
C. Camillo, Rayoun Ramendra, Miguel M. Leiva‐Juárez, Renu Nandakumar, Serge Cremers, Ella Hustzi, Andrew T. Sage, Jan Havlín, Luke Benvenuto, Selim M. Arcasoy, Shaf Keshavjee, Tereza Martinu, F. D’Ovidio

Bibliographic record

VenueTransplantation · 2024
Typearticle
Languageen
FieldMedicine
TopicTransplantation: Methods and Outcomes
Canadian institutionsUniversity Health Network
Fundersnot available
KeywordsLungMedicineSignature (topology)Multicenter studyComputer scienceInternal medicineGastroenterologyMathematics

Abstract

fetched live from OpenAlex

Purpose: Bile acids (BA) have been independently validated as a marker of aspiration linked to increased risk of chronic lung allograft dysfunction (CLAD). We aimed to confirm that a large airway bronchial wash (LABW) BA-based aspiration signature will predict CLAD in a large multi-center cohort and will be associated with inflammation. Methods: Two-center retrospective (n=313) cohort included consecutive lung transplant recipients with LABW available at 3 months post-transplant. Fifteen BA and 48 inflammatory mediators were measured by tandem mass spectrometry and by 48-multiplex assay, respectively. Cox regression model, logistic regression and non-parametric statistical analyses ware performed. Results: The median concentration of total BA was 4.25nM (ir:1.9-14.3). Primary conjugated BA were the most abundant species. 8.6nM and 86% were the upper tertile cut-offs used to define high total BA concentration and percent conjugated BA, respectively. Having both high total BA levels and high percentage of conjugated BA independently predicted CLAD (HR 1.9, 95% CI 1.2-2.9, p=0.005) and mortality (HR 2.6, 95% CI 1.7-4.0, p<0.001). Primary BAs strongly correlated with most cytokines. Conclusion: Elevated BA in LABW at 3 months after transplant, particularly conjugated BA, predict mortality and CLAD. Increased levels of primary BA correlate with high cytokines, highlighting their pro-inflammatory role. These findings in a large multi-center cohort support our previous observations that a LABW bile acid-based signature can serve as a diagnostic tool for aspiration and as a predictor of poor long-term outcomes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.314
Teacher spread0.290 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2024
Admission routes1
Has abstractyes

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