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Purine catabolism regulates the production of IL-1beta in macrophages

2024· article· en· W4404167434 on OpenAlexaff
Anne‐Sophie Archambault, Lauar de Brito Monteiro, Lucas Starchuck, Ju‐Hee Oh, Emilia Perraso, Annette Patterson, C. Bruce Verchere, Ramon I. Klein Geltink

Bibliographic record

VenueThe Journal of Immunology · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdenosine and Purinergic Signaling
Canadian institutionsBC Children's HospitalUniversity of British Columbia
Fundersnot available
KeywordsCatabolismCell biologyProduction (economics)ChemistryBiologyBiochemistryMetabolismEconomics

Abstract

fetched live from OpenAlex

Abstract Activation of pro-inflammatory (M1-like) macrophages leads to the production of pro-inflammatory cytokines, such as IL-1b, TNFa and IL-6. Those cytokines are important in the control of infections, but overproduction can lead to chronic inflammation. M1-like macrophages undergo metabolic remodeling, including the upregulation of purine metabolism. Using inhibitors of purine breakdown or purine synthesis, we aimed to identify the role of purine metabolism in M1-like macrophage function. Blocking purine synthesis or purine breakdown did not affect the frequency of CD80+CD86+iNOS+macrophages, nor the accumulation of the M1-like macrophages hallmark metabolites itaconate and succinate, critical for immune function. However, inhibition of purine synthesis significantly reduced IL-1bsecretion. Mature IL-1b release is dependent on both transcriptional activation of the pro-IL1 gene and NLRP3-inflammasome. Blockade of purine synthesis sustained pro-IL1 transcription, an accumulation of pro-IL1b and significantly reduced caspase-1 activity. When purine degradation was inhibited, we observed no change in IL-1b production, but a reduced TNFa and IL-6. In summary, purine metabolism is dispensable for the immunophenotype of M1-like macrophages, but it regulates macrophage cytokine production. Targeting specific nodes in purine metabolism in macrophages provides opportunities for immunomodulation in inflammatory diseases affected by pro-inflammatory macrophage-linked cytokines.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.237
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2024
Admission routes1
Has abstractyes

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