MétaCan
Menu
Back to cohort
Record W4404384004 · doi:10.1039/d4fo03322a

Cross-domain binding of anti-fibrillation peptide TNGQ to islet amyloid polypeptide provides cytoprotective effects in giant unilamellar vesicles and pancreatic β-cells

2024· article· en· W4404384004 on OpenAlexafffund
Raliat O. Abioye, Martha S. Yiridoe, Chenyang Wang, Tyler J. Avis, Tamer A. Ahmed, Riadh Hammami, Chibuike C. Udenigwe

Bibliographic record

VenueFood & Function · 2024
Typearticle
Languageen
FieldMedicine
TopicAlzheimer's disease research and treatments
Canadian institutionsCarleton UniversityUniversity of Ottawa
FundersNatural Sciences and Engineering Research Council of CanadaUniversity of Ottawa
KeywordsIsletAmyloid (mycology)CytotoxicityFibrillationPeptideVesicleChemistryFibrilPancreatic isletsCell biologyBiochemistryPancreatic polypeptideBiophysicsInsulinInternal medicineIn vitroBiologyEndocrinologyMembraneMedicineAtrial fibrillation

Abstract

fetched live from OpenAlex

Islet amyloid polypeptide (IAPP) fibrillation induces β-cell dysfunction and toxicity in patients with type 2 diabetes. Cytotoxicity is caused by the ability of IAPP fibrils and fibrillar intermediates to permeate the cellular membrane of pancreatic β-cells, trigger endoplasmic reticular stress, induce reactive oxygen species production, and upregulate apoptosis-related genes. Thus, inhibition of IAPP fibrillation is of great interest for preventing associated cytotoxicity. In this study, the cellular protective effects of three anti-fibrillation tetrapeptides, YMSV, MANT, and TNGQ, against IAPP fibrillation-induced membrane leakage in giant unilamellar vesicles (GUVs) and toxicity in RIN-m cells were evaluated. The anti-fibrillation activity of TNGQ translated to cytoprotective effects as it resulted in a 69.0 ± 7.9% decrease in calcein release in GUVs and a significant increase in cell viability from 6.4 ± 6.4% with IAPP to 47.5 ± 3.8% with the addition of TNGQ. MANT slightly inhibited IAPP-induced GUV leakage and increased cell viability. In contrast, the protective effect of YMSV against IAPP fibrillation-induced membrane damage in GUVs was completely diminished in β-cells. Molecular docking of pentameric IAPP showed that Asn21 and Asn22 of IAPP are important for inhibitor binding, which, coupled with the cross-domain binding interactions of TNGQ, explains its stronger anti-fibrillation and cytoprotective effects than MANT and YMSV. These findings provide insights into the functional significance of peptide-IAPP binding interactions in mitigating fibrillation and IAPP fibrillation-induced cytotoxicity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.527
Threshold uncertainty score0.659

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.277
Teacher spread0.263 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes2
Has abstractyes

Explore more

Same venueFood & FunctionSame topicAlzheimer's disease research and treatmentsFrench-language works237,207