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Record W4404794129 · doi:10.1016/j.jplph.2024.154394

Alteration in the balance between ABA and GA signaling mediates genetic variation in induction and retention of dormancy during seed maturation in wheat

2024· article· en· W4404794129 on OpenAlexaff
Tran‐Nguyen Nguyen, Pham Anh Tuan, Deepak Sharma, Belay T. Ayele

Bibliographic record

VenueJournal of Plant Physiology · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSeed Germination and Physiology
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsDormancyBiologyGenetic variationVariation (astronomy)Balance (ability)BotanyCell biologyGerminationGeneticsGeneNeuroscience

Abstract

fetched live from OpenAlex

Induction and retention of dormancy are among the physiological processes that take place during seed maturation; however, the molecular mechanisms underlying these events are poorly understood in wheat. This study revealed that seed maturation in wheat is associated with decreases in abscisic acid (ABA) and gibberellin (GA) levels irrespective of dormancy level exhibited by the seeds mainly via expression of specific ABA ( TaCYP707A 1) and GA ( TaGA3ox2 , TaGA2ox3 and TaGA2ox6 ) metabolism genes. Consistently, ABA to GA level ratio decreased during maturation in both highly dormant and low-dormant seeds with no apparent difference in the ratio of their levels between the two seed samples. Our data, however, showed a close association between the induction and retention of dormancy during seed maturation and modulation of the balance between ABA and GA signaling via expression of specific genes that acts as positive regulators seed response to ABA ( TaPYL5 and TaABI5 ) and GA ( TaGAMyb ). Consistently, the highly dormant and low-dormant seeds exhibited substantial variation in their sensitivity to ABA and GA during their maturation. The findings of this study highlight that genetic variation in induction and retention of dormancy during wheat seed maturation can be mediated by a shift in balance between seed sensitivity to ABA and GA independent of a shift in balance between their levels. • Physiological maturity marks onset of genetic variation in dormancy in wheat seeds. • Induction/retention of dormancy level varies with no change in ABA to GA level ratio. • Seed sensitivity to ABA and GA controls variation in dormancy induction/retention. • Specific ABA and GA signaling genes mediate variation in sensitivity to ABA and GA.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Direct model labels (unvalidated)

Per-model category and study-design labels from the labeling rounds. They are machine output, unvalidated, and the disagreement between models ships as data. No study design here is MEDLINE-validated yet.

Model armCategoriesStudy designConfidence
gemmano category
Domain: not available · Genre: Empirical
About the Canadian research system: no · About a Canadian topic: no
Observationallow
gptno category
Domain: not available · Genre: Empirical
About the Canadian research system: no · About a Canadian topic: no
Bench or experimentallow
models splitAgreement compares identical category sets and study designs across arms.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.988
Threshold uncertainty score0.087

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.221
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Labeled directly by 2 models reading the full record.

The models applied no category: nothing in the taxonomy fit this work.

The models disagree on parts of this classification; every voice is preserved in the section at the end of the page.

Study designObservational · Bench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes1
Has abstractyes

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