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Record W4405100126 · doi:10.1162/imag_a_00408

A hierarchical Bayesian brain parcellation framework for fusion of functional imaging datasets

2024· article· en· W4405100126 on OpenAlexaff
Zhi Da, Ladan Shahshahani, Caroline Nettekoven, Ana Lúısa Pinho, Danilo Bzdok, Jörn Diedrichsen

Bibliographic record

VenueImaging Neuroscience · 2024
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsMcGill UniversityWestern University
Fundersnot available
KeywordsBayesian probabilityComputer scienceArtificial intelligenceNeuroimagingPattern recognition (psychology)PsychologyNeuroscience

Abstract

fetched live from OpenAlex

Different task-based and resting-state imaging datasets provide complementary information about the organization of the human brain. Brain parcellations based on single datasets will, therefore, be biased toward the particular type of information present in each dataset. To overcome this limitation, we propose here a hierarchical Bayesian framework that can learn a probabilistic brain parcellation across numerous task-based and resting-state datasets, exploiting their combined strengths. The framework is partitioned into a spatial arrangement model that defines the probability of each voxel belonging to a specific parcel (the probabilistic group atlas), and a set of dataset-specific emission models that define the probability of the observed data given the parcel of the voxel. Using the human cerebellum as an example, we show that the framework optimally combines information from different datasets to achieve a new population-based atlas that outperforms atlases based on single datasets. Furthermore, we demonstrate that using only 10 min of individual data, the framework is able to generate individual brain parcellations that outperform group atlases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.013
Threshold uncertainty score0.036

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.010
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0020.003
Science and technology studies0.0010.002
Scholarly communication0.0020.002
Open science0.0030.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.316
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes1
Has abstractyes

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