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Record W4405190701 · doi:10.3390/cancers16234116

Prediagnostic Plasma Nutrimetabolomics and Prostate Cancer Risk: A Nested Case–Control Analysis Within the EPIC Study

2024· article· en· W4405190701 on OpenAlexaff
Enrique Almanza‐Aguilera, Miriam Martínez‐Huélamo, Yamilé López‐Hernández, Daniel Guiñón-Fort, Anna Guadall, Meryl B. Cruz, Aurora Perez‐Cornago, Agnetha Linn Rostgaard‐Hansen, Anne Tjønneland, Christina C. Dahm, Verena Katzke, Matthias B. Schulze, Giovanna Masala, Claudia Agnoli, ­Rosario ­Tumino, Fulvio Ricceri, Cristina Lasheras, Marta Crous‐Bou, María‐José Sánchez, Amaia Aizpurua-Atxega, Marcela Guevara, Konstantinos K. Tsilidis, Anastasia Chrysovalantou Chatziioannou, Elisabete Weiderpass, Ruth C. Travis, David S. Wishart, Cristina Andrés‐Lacueva, Raúl Zamora‐Ros

Bibliographic record

VenueCancers · 2024
Typearticle
Languageen
FieldMedicine
TopicNutritional Studies and Diet
Canadian institutionsThe Metabolomics Innovation CentreUniversity of Alberta
FundersSchool of Public Health, Imperial College LondonRijksinstituut voor Volksgezondheid en MilieuInstituto de Salud Carlos IIIAgència de Gestió d'Ajuts Universitaris i de RecercaWorld Cancer Research FundMedical Research CouncilInstitut Gustave-RoussyAgencia Estatal de InvestigaciónDeutsche KrebshilfeVetenskapsrådetInstitució Catalana de Recerca i Estudis AvançatsCancerfondenCancer Research UKWorld Health OrganizationKræftens BekæmpelseUniversiteit UtrechtMutuelle Générale de l'Education NationaleAssociazione Italiana per la Ricerca sul CancroCentro de Investigación Biomédica en Red Fragilidad y Envejecimiento SaludableImperial College LondonDeutsches KrebsforschungszentrumLigue Contre le CancerGeneralitat de CatalunyaEuropean Regional Development FundBundesministerium für Bildung und ForschungNational Institute for Health and Care ResearchCentres de Recerca de CatalunyaInstitut National de la Santé et de la Recherche MédicaleMinisterie van Volksgezondheid, Welzijn en SportNIHR Imperial Biomedical Research CentreCentre International de Recherche sur le Cancer
KeywordsNested case-control studyEPICProstate cancerMedicineOncologyCase-control studyCancerInternal medicine

Abstract

fetched live from OpenAlex

Background and Objective: Nutrimetabolomics may reveal novel insights into early metabolic alterations and the role of dietary exposures on prostate cancer (PCa) risk. We aimed to prospectively investigate the associations between plasma metabolite concentrations and PCa risk, including clinically relevant tumor subtypes. Methods: We used a targeted and large-scale metabolomics approach to analyze plasma samples of 851 matched PCa case–control pairs from the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort. Associations between metabolite concentrations and PCa risk were estimated by multivariate conditional logistic regression analysis. False discovery rate (FDR) was used to control for multiple testing correction. Results: Thirty-one metabolites (predominately derivatives of food intake and microbial metabolism) were associated with overall PCa risk and its clinical subtypes (p < 0.05), but none of the associations exceeded the FDR threshold. The strongest positive and negative associations were for dimethylglycine (OR = 2.13; 95% CI 1.16–3.91) with advanced PCa risk (n = 157) and indole-3-lactic acid (OR = 0.28; 95% CI 0.09–0.87) with fatal PCa risk (n = 57), respectively; however, these associations did not survive correction for multiple testing. Conclusions: The results from the current nutrimetabolomics study suggest that apart from early metabolic deregulations, some biomarkers of food intake might be related to PCa risk, especially advanced and fatal PCa. Further independent and larger studies are needed to validate our results.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.004
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.280
Teacher spread0.269 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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