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Record W4405280961 · doi:10.1111/syen.12662

Gastritis over <i>Gastrisus</i> Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics

2024· article· en· W4405280961 on OpenAlexaff
Adam Brunke, Stylianos Chatzimanolis

Bibliographic record

VenueSystematic Entomology · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicColeoptera Taxonomy and Distribution
Canadian institutionsAgriculture and Agri-Food Canada
FundersUniversity of Tennessee at Chattanooga
KeywordsBiologyPhylogenomicsZoologyEcologyPhylogeneticsClade

Abstract

fetched live from OpenAlex

Abstract With 334 species, the subtribe Xanthopygina forms a diverse and ecologically dominant component of the Neotropical beetle fauna, ranging from the southern United States south to Argentina. Species can be abundant in a variety of microhabitats and are frequently encountered in tropical forests. Although a number of morphologically distinct genera are now well defined and identifiable, the subtribe still suffers from several poorly defined genera with relatively generalized morphology. The worst of these is the genus Gastrisus Sharp, which has never had a morphological definition per se and has, over time, accumulated many morphologically disparate species. This nebulous concept of Gastrisus has further made it difficult to generically assign and describe new species. Here we assembled a phylogenomic dataset using anchored hybrid enrichment across a broad sample of Xanthopygina, including nearly all described genera, a representation of morphological variation within Gastrisus and a number of undescribed taxa we were unable to assign to a genus. Both maximum likelihood and coalescent analyses converged on a well resolved and stable topology for the subtribe, which will serve as a critical framework for continued taxonomic progress in Xanthopygina. Nine major lineages were identified, most congruent with previous work. The limits of Gastrisus were successfully identified, and the monophyletic core of the genus was recovered as sister to a redefined Nausicotus Sharp, which included Torobus syn. n. Several large species of Gastrisus were resolved as a clade of the Xanthopygus group and are here placed in Drepanagrios gen. n. An additional six new genera were discovered but will be described and treated in detail in future papers. In addition to Gastrisus , Phanolinus Sharp, Xenopygus Bernhauer, Phanolinopsis Scheerpeltz and Ocyolinus Sharp were recovered as paraphyletic, resulting in Elecatopselaphus syn. n. ( =Phanolinus ), the re‐validation of Leptodiastemus Bernhauer stat. ressur. and the redefinition of Xenopygus , Phanolinopsis and Ocyolinus . We propose Phanolinus scheerpeltzi nom. n. as a replacement name for Phanolinus peruvianus (Scheerpeltz 1972, nec Bernhauer 1917) (previously Elecatopselaphus ).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.161
Threshold uncertainty score0.563

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.218
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes1
Has abstractyes

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