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Record W4405550336 · doi:10.1186/s13063-024-08653-1

Re-analysis of data from cluster randomised trials to explore the impact of model choice on estimates of odds ratios: study protocol

2024· article· en· W4405550336 on OpenAlexaff
Karla Hemming, Jacqueline Thompson, Monica Taljaard, Sam Watson, Jessica Kasza, JA Thompson, Brennan C Kahan, Andrew Copas

Bibliographic record

VenueTrials · 2024
Typearticle
Languageen
FieldMathematics
TopicStatistical Methods and Bayesian Inference
Canadian institutionsOttawa HospitalUniversity of Ottawa
FundersDepartment of Health and Social CareMedical Research CouncilNational Institute for Health and Care Research
KeywordsProtocol (science)OddsMedicineCluster (spacecraft)Cluster analysisOdds ratioResearch designStatisticsComputer scienceData miningEconometricsLogistic regressionAlternative medicineMachine learningMathematics

Abstract

fetched live from OpenAlex

BACKGROUND: There are numerous approaches available to analyse data from cluster randomised trials. These include cluster-level summary methods and individual-level methods accounting for clustering, such as generalised estimating equations and generalised linear mixed models. There has been much methodological work showing that estimates of treatment effects can vary depending on the choice of approach, particularly when estimating odds ratios, essentially because the different approaches target different estimands. METHODS: In this manuscript, we describe the protocol for a planned re-analysis of data from a large number of cluster randomised trials. Our main objective is to examine empirically whether and how odds ratios estimated using different approaches (for both primary and secondary binary outcomes) vary in cluster randomised trials. We describe the methods that will be used to identify the datasets for inclusion and how they will be analysed and reported. DISCUSSION: There have been a number of small comparisons of empirical differences between the different approaches to analysis for CRTs. The systematic approach outlined in this protocol will allow a much deeper understanding of when there are important choices around the model approach and in which settings. This will be of importance given the heightened awareness of the importance of estimands and the specification of statistical analysis plans.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.312
metaresearch head score (Gemma)0.565
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Protocol · Consensus signal: Protocol
Teacher disagreement score0.688
Threshold uncertainty score0.848

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.3120.565
Meta-epidemiology (narrow)0.0070.005
Meta-epidemiology (broad)0.0110.015
Bibliometrics0.0070.009
Science and technology studies0.0030.005
Scholarly communication0.0060.007
Open science0.0060.005
Research integrity0.0140.015
Insufficient payload (model declined to judge)0.0540.017

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.717
GPT teacher head0.625
Teacher spread0.092 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designSimulation or modeling
DomainMethods
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes1
Has abstractyes

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