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Record W4405700900 · doi:10.1186/s12963-024-00360-y

Number needed to isolate - a new population health metric to quantify transmission reductions from isolation interventions for infectious diseases

2024· article· en· W4405700900 on OpenAlex
Aaron Prosser, Bartosz Helfer, David L. Streiner

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenuePopulation Health Metrics · 2024
Typearticle
Languageen
FieldMathematics
TopicCOVID-19 epidemiological studies
Canadian institutionsMcMaster University
Fundersnot available
KeywordsMedicinePopulationMetric (unit)Isolation (microbiology)Transmission (telecommunications)Psychological interventionNumber needed to treatHerd immunityRelative riskEnvironmental healthBiologyBioinformaticsComputer scienceConfidence intervalInternal medicine

Abstract

fetched live from OpenAlex

BACKGROUND: We have previously developed and reported on a procedure for estimating the purported benefits of immunity mandates using a novel variant of the number needed to treat (NNT) which we called the number needed to isolate (NNI). Here we demonstrate its broader properties as a useful population health metric. MAIN BODY: The NNI is analogous to the number needed to treat (NNT = 1/ARR), except the absolute risk reduction (ARR) is the absolute transmission risk in a specific population. The NNI is the number of susceptible hosts in a population who need to be isolated to prevent one transmission event from them. The properties and utility of the NNI were modeled using simulated data and its model predictions were validated using real world data. The properties of the NNI are described for three categories of data from a previous study on transmissibility of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2): (1) in different settings, (2) after a specific exposure and (3) depending on symptomaticity status of susceptible hosts. CONCLUSIONS: We provide a demonstration of the utility of the NNI as a valuable population health metric to quantify the transmission reductions from isolation interventions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.012
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Meta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.816
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.012
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.007
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.373
GPT teacher head0.542
Teacher spread0.169 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it