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Record W4405796181 · doi:10.1136/rmdopen-2024-004628

Anatomy-centred deep learning improves generalisability and progression prediction in radiographic sacroiliitis detection

2024· article· en· W4405796181 on OpenAlexaff
Felix J. Dorfner, Janis L. Vahldiek, Leonhard Donle, Andrei Zhukov, Lina Xu, Hartmut Häntze, Marcus R. Makowski, Hugo J.W.L. Aerts, Fabian Proft, Valeria Ríos Rodríguez, Judith Rademacher, Mikhail Protopopov, Hildrun Haibel, Kay‐Geert Hermann, Torsten Diekhoff, Lisa C Adams, Murat Torğutalp, Denis Poddubnyy, Keno K. Bressem

Bibliographic record

VenueRMD Open · 2024
Typearticle
Languageen
FieldMedicine
TopicSpondyloarthritis Studies and Treatments
Canadian institutionsUniversity of Toronto
FundersJanssen BiotechBerlin Institute of HealthSwedish Orphan BiovitrumTechnische Universität MünchenEuropean CommissionBundesministerium für Bildung und ForschungCanon Medical Systems CorporationMax Kade FoundationSchering-PloughAbbVieBayern InnovativCelgenePfizerAustralian GovernmentWyethWilhelm Sander-StiftungAmgenEli Lilly and CompanyBristol-Myers Squibb
KeywordsMedicineSacroiliitisDeep learningRadiographyRadiographic anatomyArtificial intelligenceAnatomyMedical physicsRadiologyDiseasePathology

Abstract

fetched live from OpenAlex

PURPOSE: To examine whether incorporating anatomy-centred deep learning can improve generalisability and enable prediction of disease progression. METHODS: This retrospective multicentre study included conventional pelvic radiographs of four different patient cohorts focusing on axial spondyloarthritis collected at university and community hospitals. The first cohort, which consisted of 1483 radiographs, was split into training (n=1261) and validation (n=222) sets. The other cohorts comprising 436, 340 and 163 patients, respectively, were used as independent test datasets. For the second cohort, follow-up data of 311 patients was used to examine progression prediction capabilities. Two neural networks were trained, one on images cropped to the bounding box of the sacroiliac joints (anatomy-centred) and the other one on full radiographs. The performance of the models was compared using the area under the receiver operating characteristic curve (AUC), accuracy, sensitivity and specificity. RESULTS: On the three test datasets, the standard model achieved AUC scores of 0.853, 0.817, 0.947, with an accuracy of 0.770, 0.724, 0.850. Whereas the anatomy-centred model achieved AUC scores of 0.899, 0.846, 0.957, with an accuracy of 0.821, 0.744, 0.906, respectively. The patients who were identified as high risk by the anatomy-centred model had an OR of 2.16 (95% CI 1.19, 3.86) for having progression of radiographic sacroiliitis within 2 years. CONCLUSION: Anatomy-centred deep learning can improve the generalisability of models in detecting radiographic sacroiliitis. The model is published as fully open source alongside this study.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.560
Threshold uncertainty score0.392

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.299
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2024
Admission routes1
Has abstractyes

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