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Record W4405820759 · doi:10.54254/2753-8818/2024.18872

Epigenetic Regulation of the Circadian Clock: Mechanisms and Clinical Implications

2024· article· en· W4405820759 on OpenAlex
Jinhee Chang

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueTheoretical and Natural Science · 2024
Typearticle
Languageen
FieldNeuroscience
TopicCircadian rhythm and melatonin
Canadian institutionsMcMaster University
Fundersnot available
KeywordsEpigenomeEpigeneticsCircadian clockCircadian rhythmBiologyDNA methylationCLOCKEpigenomicsHistoneComputational biologyGeneticsNeuroscienceGeneGene expression

Abstract

fetched live from OpenAlex

The circadian clock, a fundamental timekeeping system, is regulated by complex epigenetic mechanisms. This review explores the role of DNA methylation, histone modifications, and the NAD+-dependent deacetylase SIRT1 in modulating circadian gene expression. Rhythmic epigenetic changes at clock gene promoters contribute to their periodic transcription, while interactions between circadian transcription factors and epigenetic modifiers ensure robust gene expression rhythms. Dysregulation of the circadian epigenome has been associated with various diseases, including cancer, where altered DNA methylation patterns of clock genes have been observed. Understanding the mechanisms and consequences of circadian epigenetic dysregulation may lead to novel diagnostic and therapeutic approaches for circadian-related diseases. To fully elucidate the intricate relationship between the circadian clock and the epigenome, a multidisciplinary approach combining experimental and computational methods is necessary. High-throughput analytical techniques, functional genomics, epigenetic editing tools, and systems biology modeling will provide a comprehensive view of the circadian epigenome. Ultimately, a deeper understanding of the epigenetic regulation of the circadian clock will advance our knowledge of biological timekeeping and inform the development of chronotherapeutic strategies for improving human health in the modern 24/7 society.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.235
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.004
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.294
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it