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Record W4405987731 · doi:10.1093/biolinnean/blae102

Deciduous and evergreen perennials have higher antioxidant levels and more reactive oxygen species-susceptible chlorophyll-binding proteins

2024· article· en· W4405987731 on OpenAlexaff
Kenyon J. Nisbett, Nicki Rostami, Dhan A Failas, Jason C. L. Brown

Bibliographic record

VenueBiological Journal of the Linnean Society · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant responses to elevated CO2
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsBiologyEvergreenDeciduousPerennial plantReactive oxygen speciesChlorophyllBotanyAntioxidantEcologyBiochemistry

Abstract

fetched live from OpenAlex

Abstract Perennials live longer than annuals, yet the underlying physiological mechanisms responsible are poorly understood. We gathered data from published reports to investigate two hypotheses based on the oxidative stress theory of ageing. The first hypothesis was that perennials maintain higher antioxidant levels to neutralize reactive oxygen species (ROS) better, before they cause oxidative damage. Although carotenoid levels did not differ between annuals and perennials, we found that deciduous perennials had higher activity of the ascorbate–glutathione cycle, and evergreen perennials had higher activity of superoxide dismutase (SOD, EC 1.15.1.1). The second hypothesis was that chlorophyll-binding proteins of perennials have a lower proportion of ROS-susceptible amino acids to protect chlorophyll better from oxidative damage. Contrary to our predictions, although LHCI, LHCII, CP26, and CP29 showed no difference in amino acid composition between annuals and perennials, D1 protein and CP24 had a higher proportion of ROS-susceptible amino acids in both deciduous and evergreen perennials. By being more susceptible to ROS attack, these proteins might minimize oxidative damage to chlorophyll and/or contain oxidative damage within the photosystems such that it does not spread to other cell regions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.045
GPT teacher head0.248
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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