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Record W4405991266 · doi:10.31742/isgpb.84.3.18

Pathogenic and genetic variation among Fusarium graminearum isolates causing head scab of wheat in India

2024· article· en· W4405991266 on OpenAlexaboutno aff
Akshay Kumar H M, Rashmi Aggarwal, Malkhan Singh Gurjar, Himanshu Dubey, P. Nallathambi, M. S. Saharan

Bibliographic record

VenueIndian Journal of Genetics and Plant Breeding (The) · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Disease Resistance and Genetics
Canadian institutionsnot available
Fundersnot available
KeywordsFusariumBiologyGenetic variationVeterinary medicineBotanyGeneticsMedicineGene

Abstract

fetched live from OpenAlex

Fusarium head blight (FHB) or head scab of wheat caused by Fusarium spp., is a global concern as recent outbreaks reported in Canada, Europe, Asia, Australia and South America. Presently, FHB is a minor disease in India but can cause significant yield loss if rain occurs during mid anthesis in Himachal Pradesh, Uttarakhand, the foot hills of Punjab and hilly areas in Tamil Nadu. Among head scab infected wheat ear heads collected from Dalang Maidan, Lahaul valley of Himachal Pradesh and Wellington, Nilgiris hills, Tamil Nadu, dominance of F. graminearum was observed. Twenty-nine Fusarium isolates were identified as F. graminearum based on morphological, cultural and molecular approaches. Pathogenic variation among 29 F. graminearum isolates was observed on wheat varieties (UP 2338, PBW 343, Sonalika, HD 2967, HD 3086, HD 29, MACS 5049, HS 645, VL 1013). After 7 and 14 days of inoculation, isolates from Wellington (Fg-W10 and Fg-W24) were found highly pathogenic while isolates Fg-W7 and Fg-W26 were found least pathogenic. Out of 23 SSR markers designed using whole genome sequence of F. graminearum PH-1 strain, 21 SSRs amplified F. graminearum isolates. Cluster analysis separated the isolates into two main groups. Group A consisting two isolates one from Wellington (Fg-W27) and another from Lahaul Spiti (Fg-L2). Group B contained all other 27 isolates. This study has shown that there is considerable pathogenic and genetic variability among F. graminearum isolates obtained from infected wheat ear heads from different geographic regions of India.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.206
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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