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Record W4406588672 · doi:10.1016/j.gca.2025.01.025

Discovery of Ge2+ in quartz: Evidence from EPR/XAS experiments and DFT calculations, and implications for Ge/Si systematics

2025· article· en· W4406588672 on OpenAlexafffund
R. I. Mashkovtsev, Sanda M. Botis, Jinru Lin, Reza Deevsalar, Leo Ka Long Cheung, Eli Wiens, Ayetullah Tunc, Ning Chen, Roman Chernikov, Yuanming Pan

Bibliographic record

VenueGeochimica et Cosmochimica Acta · 2025
Typearticle
Languageen
FieldMaterials Science
TopicGlass properties and applications
Canadian institutionsCanadian Light Source (Canada)University of Saskatchewan
FundersNational Research Council CanadaSobolev Institute of Mathematics, Siberian Branch, Russian Academy of SciencesWestern Economic Diversification CanadaNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchSiberian Branch, Russian Academy of SciencesCanadian Light Source
KeywordsSystematicsX-ray absorption spectroscopyElectron paramagnetic resonanceQuartzGeologyMaterials sciencePhysicsAbsorption spectroscopyNuclear magnetic resonancePaleontologyOpticsBiology

Abstract

fetched live from OpenAlex

The Ge/Si systematics as a biogeochemical tracer with diverse applications from paleo-climatic reconstructions to discrimination of magma sources and elucidation of Earth’s early evolution hinges on the coherent behavior of these elements in the tetravalent state. However, determination of Ge speciation in quartz and other silicate minerals is technically challenging because this element almost invariably occurs at several parts per million or lower concentrations. This contribution reports a detailed study of Ge speciation in quartz by combining single-crystal electron paramagnetic resonance spectroscopy, synchrotron X-ray absorption spectroscopy, and ab initio theoretical calculations. Our single-crystal and powder electron paramagnetic resonance spectra of artificially irradiated quartz reveal a suite of previously reported Ge electron centers (GECs) such as [GeHLi 2 ] 0 and [GeHH 2 ] 0 centers as well as a new GeHLi center. These multiply-compensated GECs in artificially irradiated quartz suggest that their precursors before irradiation involve the diamagnetic Ge 2+ state. Ge K -edge X-ray absorption spectroscopic data of selected quartz samples further support the presence of Ge 2+ . Theoretical calculations reproduce the experimental 1 H and 7 Li hyperfine constants of the [GeHLi 2 ] 0 center and suggest the new GeHLi center to be a new variant of the multiply-compensated GECs with the second monovalent cation in a distant c -axis channel, again supporting the Ge 2+ state. The presence of Ge 2+ in sedimentary-diagenetic quartz, in particular, challenges existing thermodynamic data that Ge 4+ is the only stable oxidation state in aqueous solutions under near-surface conditions. Incorporation of Ge 2+ in quartz and other silicates can significantly affect Ge/Si fractionations, with important implications for their applications as a biogeochemical tracer from surficial environments to magmatic-hydrothermal systems, Earth’s core-mantle differentiation, and other planetary processes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.423
Threshold uncertainty score0.704

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.316
Teacher spread0.279 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2025
Admission routes2
Has abstractyes

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