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Record W4407099934 · doi:10.1101/2025.01.28.635229

Association of human gut microbiota with Alzheimer’s disease pathogenesis: An exploratory clinical study

2025· preprint· en· W4407099934 on OpenAlexaff
Tadashi Ohara, Yasuyuki Taki, Shinya Yamamoto

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsInstitute of Aging
Fundersnot available
KeywordsPathogenesisAssociation (psychology)DiseaseGut floraGut–brain axisMedicineBiologyImmunologyPathologyPsychology

Abstract

fetched live from OpenAlex

Abstract The relationship between Alzheimer’s disease (AD) onset and the brain–gut axis has garnered increasing attention. This study aimed to investigate the potential role of the brain–gut axis in AD pathogenesis, with a specific focus on microbiota composition. This exploratory study enrolled 10 patients with AD and 13 healthy adults, grouped by age (≤30 years, 31–40 years, and ≥41 years). Fecal samples were collected, and 16S rRNA gene sequencing was employed to analyze differences in fecal microbiota composition at the bacterial species level. Certain bacterial species appeared more abundant in the AD group (e.g., Ruminococcus inulinivorans and Ruminococcus torques ), while others were relatively more abundant in healthy adults (e.g., Prevotella vulgatus 1 , Bacteroides wexlerae , Clostridium butyricum , and Alistipes rectalis ). However, these differences were not statistically significant, likely because of the limited sample size. These findings suggest that fecal microbiota composition may differ between patients with AD and healthy individuals, with a potential intermediate group at risk of AD development. Larger-scale clinical studies are necessary to further elucidate the bacterial species associated with AD pathogenesis, potentially enabling the use of microbiota composition as a screening tool to distinguish between healthy individuals, patients with AD, and those with preclinical AD.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.300
Teacher spread0.271 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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