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Record W4407895407 · doi:10.3389/fsybi.2025.1517337

Assessing changes to the root biofilm microbial community on an engineered floating wetland upon exposure to a controlled diluted bitumen spill

2025· article· en· W4407895407 on OpenAlexafffundabout
Madeline Stanley, Lisa Peters, Aidan Guttormson, Julien Tremblay, Jessica Wasserscheid, Lauren Timlick, Charles W. Greer, José Luis Rodríguez‐Gil, Thor Halldorson, Sonya M. Havens, Richard Grosshans, Elliott Taylor, Gregg T. Tomy, David B. Levin, Vince Palace

Bibliographic record

VenueFrontiers in Synthetic Biology · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicCoastal wetland ecosystem dynamics
Canadian institutionsUniversity of WinnipegNational Research Council CanadaUniversity of ManitobaInternational Institute for Sustainable Development
FundersNatural Sciences and Engineering Research Council of CanadaMitacsGenome Canada
KeywordsBiofilmWetlandEnvironmental scienceMicrobial population biologyEnvironmental chemistryEcologyChemistryBiologyBacteria

Abstract

fetched live from OpenAlex

Conventional oil spill recovery practices can damage sensitive habitats, like freshwater shorelines, and leave residual oil in the environment, causing chronic exposure to interacting biota. Non-invasive remediation efforts are required to enhance recovery of residual oil after primary recovery without further environmental damage. Engineered Floating Wetlands (EFWs), also known as Floating Treatment Wetlands, have been used around the world for phytoremediation and biodegradation of aquatic contaminants. EFWs have the potential to increase crude oil biodegradation by enhancing surface area for microbial colonization and interaction with contaminants in the water column. To assess changes in the prokaryotic and eukaryotic microbial communities associated with EFWs in conjunction with primary recovery of shoreline washing, a contained oil spill of diluted bitumen was conducted in a shoreline enclosure in an experimental lake at the International Institute for Sustainable Development Experimental Lakes Area, northwestern Ontario, Canada, in 2019. Total polycyclic aromatic compound (PAC) concentrations in the water column of the experimental enclosure peaked 20 days post spill, declining to near background conditions by day 66, and were dominated by 2-, 3-, and 4-ring alkylated PACs. Although total sediment PACs were highly variable and were influenced by pyrogenic sources (e.g., retene from wood combustion/forest fires) in all sites, concentrations in the experimental enclosure indicated influence from diluted bitumen. The EFW prokaryotic community was diverse and evenly distributed, while the eukaryotic community had lower richness and evenness, with a few dominant organisms. To our knowledge, this was the first in-lake experiment studying EFWs for oil spill remediation under natural environmental conditions, responding to scientific and industrial research needs. While we were unable to confirm whether community shifts were a result of diluted bitumen or seasonal changes, EFWs supported natural microbial diversity, with presence of amplicon sequence variants capable of degrading PACs without the need for bacterial inoculation. Further research should assess EFW microbial changes with other oil products commonly transported in Canada. As well, assessing target PAC degradation rates, EFW surface area requirements, and microbial activity will continue to advance collective knowledge in this field on the potential of EFWs as a secondary remediation strategy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.404
Threshold uncertainty score0.992

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.242
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2025
Admission routes3
Has abstractyes

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