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Record W4408098752 · doi:10.1139/cjps-2024-0172

Mitigating apple replant disease with biocontrol soil treatments

2025· article· en· W4408098752 on OpenAlexafffundvenueabout
Meaghan Mechler, John A. Cline

Bibliographic record

VenueCanadian Journal of Plant Science · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversity of Guelph
FundersUniversity of Guelph
KeywordsBiologyBiological pest controlAgronomyHorticulturePlant diseaseBiotechnology

Abstract

fetched live from OpenAlex

Apple replant disease (ARD) can increase apple tree ( Malus domestica Borkh) mortality, delay production, and reduce yield, resulting in losses of up to $60 K/ha over an orchard’s lifespan. Common fumigation treatments can harm human and environmental health, have variable effectiveness, and disrupt beneficial soil microbial activity and processes. An experiment was conducted at the Simcoe Research Station in Norfolk County, Ontario to assess the effectiveness of commercially available plant growth-promoting (PGP) microbial biocontrols to treat ARD. Five treatments were replicated in-field five times as a randomized block design. Treatments included: untreated control, fumigation control (chloropicrin (FC)), PGP fungi (PGP-F), PGP rhizobacteria (PGP-R), and a combination of PGP-F and PGP-R (PGP-M). Trees growth and health and rhizosphere microbial diversity was assessed at three points over 2 years. PGP-R produced the greatest mean root mass followed by the chemical fumigation, which was 32% and 10% more root mass than the untreated control, respectively. Chemical fumigation resulted in the greatest above-ground biomass tree growth followed by the PGP-R, accumulating 30% and 6% more biomass than the untreated control. However, PGP-F accumulated less biomass than the untreated control. FC and PGP-R both resulted in strong growth but impacted the microbial community differently. PGP-R increased rhizosphere bacterial diversity and decreased fungal diversity while FC did the opposite. PGP-R changes to bacterial communities persisted while FC soils resembled the untreated control most closely after two years. These results indicate PGP-R biocontrol treatments are viable alternatives to fumigation for apple growers facing ARD.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.021

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.204
Teacher spread0.199 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes4
Has abstractyes

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