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Record W4408777622 · doi:10.1101/2025.03.21.644618

The Short Isoform of the Mouse Actin Adaptor Protein Synaptopodin-2 Activates Actin-Responsive Transcription Factors and Enhances Myoblast Fusion

2025· preprint· en· W4408777622 on OpenAlexaff
Nandini N. Margam, FuiBoon Kai, Victor Chichkov, Colin Crist, Roy Duncan

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA Research and Splicing
Canadian institutionsMcGill UniversityMcGill Genome CentreDalhousie University
Fundersnot available
KeywordsSignal transducing adaptor proteinCell biologyGene isoformFusion proteinSynaptopodinActinChemistryTranscription factorActin-binding proteinBiologyActin cytoskeletonRecombinant DNABiochemistryCytoskeletonSignal transductionCellGeneGenetics

Abstract

fetched live from OpenAlex

ABSTRACT Expression of synaptopodin-2 (SYNPO2), an actin cytoskeleton adaptor protein, is up-regulated following myoblast differentiation into myocytes and subsequently myotubes but no functional role in muscle development has been attributed to SYNPO2. We now show that of the three known mouse SYNPO2 isoforms, only the shortest isoform, SYNPO2As, is upregulated following differentiation of C2C12 myoblasts and primary mouse muscle satellite cells. Consistent with the differentiation-dependent expression pattern of these different isoforms, ectopic expression of SYNPO2As significantly increased myotube formation while the two large SYNPO2 isoforms (SYNPO2A or SYNPO2B) inhibited myocyte fusion into multinucleated myotubes. Irrespective of the fusion phenotype, all three isoforms enhanced migration of differentiating myoblasts. Knockdown studies using shRNA confirmed a pro-myogenic role for the short SYNPO2As isoform. Interestingly, SYNPO2As-transduced cells increased the transcript levels of late myogenic differentiation markers in the STARS (striated muscle activator of Rho signaling) and SRF (serum response factor) pathways that correlated with the enhanced fusion phenotype. These results identify the actin adaptor protein SYNPO2As as a new pro-myogenic factor that upregulates late myogenic differentiation markers and myotube formation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.234
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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