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Record W4409067540 · doi:10.1101/2025.03.27.645705

Evidence for a RIPK1-independent survival mechanism for CASPASE-8 in αβ T cells

2025· preprint· en· W4409067540 on OpenAlexaff
Farjana Islam, Scott Layzell, Inês Boal‐Carvalho, Benedict Seddon

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCell death mechanisms and regulation
Canadian institutionsInstitute of Infection and Immunity
FundersMedical Research Council
KeywordsMechanism (biology)RIPK1Cell biologyChemistryCaspase 8ApoptosisCaspaseCancer researchBiologyNecroptosisBiochemistryProgrammed cell deathPhilosophyEpistemology

Abstract

fetched live from OpenAlex

Abstract CASPASE8 promotes both cell death and survival by acting as a trigger of apoptosis but also a repressor of necroptosis. In T cells, CASPASE8 is required for FAS induced apoptosis, but protects activated T cells from necroptosis. The broader role and mechanisms of CASPASE8 in the wider T cell compartment is less certain. Here, we analysed mice in which Casp8 was conditionally deleted in the lymphoid compartment by huCD2iCre. In the thymus, we found evidence of a modest impairment of early thymic progenitors and a striking absence of NKT cell development. Amongst mature peripheral T cells, there was a substantial and specific reduction in the CD8 T cell compartment, that included naive, central memory and virtual memory subsets. While life spans and turnover of CD8 T cells appeared largely normal, we did identify an acute requirement for continued CASPASE8 expression for survival of a fraction of CD8 T cells, since induced Casp8 deletion by tamoxifen induced CD8 CreERT resulted in an acute loss of CD8 T cells. CASPASE8 deficient T cells were resistant to FAS or TNF induced cell death in vitro. Generating Casp8 deficient mice that express a kinase dead RIPK1 confirmed that necroptosis contributed to death of thymic progenitors and some peripheral CD8 T cell subsets in the absence of CASPASE8. However, kinase dead RIPK1 failed to restore NKT cell development and only partially rescued CD8 VM T cells, while analysing mixed bone marrow chimeras suggested that CASPASE8 deficient CD4 and CD8 T cells were less competitively fit than WT T cells, even in the absence of RIPK1 kinase activity. These latter observations suggest the existence of a novel mechanism by which CASPASE8 promotes T cell survival that is independent of its established role in repressing necroptosis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.264
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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