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Record W4409241530 · doi:10.1016/j.fcr.2025.109892

Interplay between quantitative trait loci for stem strength and agronomic traits in a wheat doubled-haploid population

2025· article· en· W4409241530 on OpenAlex
J. Allan Feurtado, Letitia Da Ros, Shola Hassan Kareem, Daiqing Huang, Lanette Ehman, Parul Jain, Leah K. Flatman, Hanna Hovland, Jeff Hovland, Brett Beckie, Richard D. Cuthbert, R. E. Knox, Andrew Burt, Jennifer W. Mitchell Fetch, Lope G. Tabil, Santosh Kumar

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueField Crops Research · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food CanadaUniversity of SaskatchewanPlant Biotechnology Institute
FundersAgriculture and Agri-Food CanadaManitoba Crop AllianceSaskatchewan Wheat Development CommissionUniversity of SaskatchewanNational Research Council CanadaGovernment of Manitoba
KeywordsBiologyQuantitative trait locusDoubled haploidyTraitPloidyPopulationAgronomyGeneticsGene

Abstract

fetched live from OpenAlex

Stem strength in wheat is important for mechanical stability, supporting nutrient translocation and lodging tolerance to uphold yield potential and grain quality. The main objectives of this study were to identify quantitative trait loci (QTLs) for stem strength and diameter and determine if stem biomechanical QTLs overlap with QTLs for yield and other agronomic traits. A doubled haploid wheat population between the distinct parents AC Cadillac and Carberry was assessed for stem biomechanical traits together with lodging, height, heading date, and yield parameters. Multi-environment QTL mapping was performed to identify potential QTL hotspots, facilitate ideotype analysis, and examine putative candidate genes. Phenotypic analyses across 6 field environments revealed significant variation for 16 stem and agronomic traits with only stem wall thickness, grain yield, and thousand-kernel-weight (TKW) not differing significantly between parents AC Cadillac and Carberry. The Reduced height ( Rht ) allele Rht-B1b , present in Carberry, was the main driver of trait differences within the population, not only reducing height but also traits such as stem bending moment and TKW. QTL mapping revealed loci for stem traits present on chromosomes 2B, 2D, 4B, 5A, 6A, 6B, 7A, and 7D. There were distinct overlaps of stem trait QTLs with those of other traits including a heading date QTL on 2B and as well as grain size QTLs on 2D, 6A, and 6B. QTLs on 2D, 6A, and 6B compensated for a decrease in TKW largely driven by Rht-B1b in Carberry and also promoted an overall increase in stem diameter and stem bending moment. The study revealed the complexity of optimizing for stem strength-related ideotypes given the possible interactions with agronomic traits such as grain size which may have contrasting priorities for allele selections. The most promising QTL hotspot on chromosome 6A drove increases in TKW, stem wall thickness and stem bending moment. The findings support broadening the scope of traits in stem biomechanical research studies to ensure pleiotropic effects, especially those on grain traits, are captured. The results obtained facilitate future work focused on the development of genetic markers for stem strength and overall germplasm improvement. • Multi-environment QTL mapping of stem and agronomic traits in Canadian spring wheat. • Interplay between grain size and stem strength traits and their overlapping QTL. • Balancing trait selections for optimal stem ideotype design in spring wheat breeding.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.842
Threshold uncertainty score0.237

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.079
GPT teacher head0.377
Teacher spread0.298 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it