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Record W4409428689 · doi:10.5670/oceanog.2025.309

The PIXIE: A Low-Cost, Open-Source, Multichannel In Situ Fluorometer Applied To Dye-Tracing in Halifax Harbor

2025· article· en· W4409428689 on OpenAlexfundaboutno aff
Kyle Park, Dariia Atamanchuk, Aaron MacNeil, Vincent J. Sieben

Bibliographic record

VenueOceanography · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicWater Quality Monitoring and Analysis
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaDartmouth CollegeCanada First Research Excellence FundAdditional VenturesOcean Frontier InstituteCanada Excellence Research Chairs, Government of Canada
KeywordsFluorometerTracingEnvironmental scienceComputer sciencePhysicsOpticsFluorescence

Abstract

fetched live from OpenAlex

Fluorometers are ubiquitous tools in the fields of oceanography, limnology, and water quality assessment. Fluorescent species in our waters range from in vivo chlorophyll, contaminants like crude oil, or intentionally added agents like rhodamine. Submersible in situ fluorometers can collect real-time data at scales that cannot be matched by discrete bottle samples with lab/​shore-side analysis. However, accessibility of sensors remains a problem recognized by the United Nations Sustainable Development Goals. Here, we introduce the PIXIE, an open-source, multichannel, in situ fluorometer that performs high-quality fluorometry at a low cost. The PIXIE is assembled by simple means from almost entirely off-the-shelf components. The few necessary custom parts are either easily outsourced or printed by consumer-grade 3D printers. The PIXIE draws an average of 225 mW during measurement and has been tested to depths of 45 m. It has been calibrated to demonstrate a limit of detection 0.01 ppb rhodamine WT (a fluorescent dye) in a range up to 60 ppb, and a limit of detection of 0.02 ppb chlorophyll a. The PIXIE has been deployed as part of a dye-tracer experiment in Halifax Harbor, Canada, demonstrating its performance in a quasi-simultaneous profiling of rhodamine WT dye and chlorophyll a.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.981
Threshold uncertainty score0.038

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.259
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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