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Record W4409528830 · doi:10.1016/j.hpj.2025.02.003

Protein post-translational modification in plants: regulation and beyond

2025· article· en· W4409528830 on OpenAlexaff
Zhenxiang Li, Liqian Qin, Dongjiao Wang, Yanlan Liang, Shoujian Zang, Tingting Sun, Wanying Zhao, Qibin Wu, Youxiong Que

Bibliographic record

VenueHorticultural Plant Journal · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicTransgenic Plants and Applications
Canadian institutionsMinistry of Agriculture
FundersCentral Public-interest Scientific Institution Basal Research Fund, Chinese Academy of Fishery SciencesAgriculture Research System of ChinaMinistry of Agriculture and Rural Affairs of the People's Republic of ChinaNational Natural Science Foundation of China
KeywordsPosttranslational modificationBiologyBiochemistryEnzyme

Abstract

fetched live from OpenAlex

Post-translational modification (PTM) of proteins is a crucial regulatory mechanism in plant cells, enabling rapid and purposeful regulation of their functions. Modified proteins play various roles in signaling pathways, including plant growth and development, plant metabolism, and the response to adversity stress. In recent years, there has been an increase in the number of studies focusing on plant PTM maps and functional analysis. Here we aim to review the PTM types in plants, especially in horticultural plants and tropical crops, the interactions between and among PTMs, and more importantly, the underlying pathways and functions. Additionally, the potential application of PTMs in breeding is briefly discussed. This paper focuses on plant PTMs and provides a foundation for further investigation into the functions and regulatory mechanisms of PTMs in plant proteins as well as for crop improvement.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.870
Threshold uncertainty score0.252

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.242
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2025
Admission routes1
Has abstractyes

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