MétaCan
Menu
Back to cohort
Record W4409675561 · doi:10.1021/acsomega.5c00109

Membrane-Active Peptides Derived from Natural Transmembrane Domains Function as Antibiotic Potentiators

2025· article· en· W4409675561 on OpenAlexafffund
Tyler S. Johnson, Charles M. Deber

Bibliographic record

VenueACS Omega · 2025
Typearticle
Languageen
FieldImmunology and Microbiology
TopicAntimicrobial Peptides and Activities
Canadian institutionsHospital for Sick ChildrenUniversity of Toronto
FundersCanadian Institutes of Health ResearchCystic Fibrosis Canada
KeywordsPotentiatorTransmembrane proteinFunction (biology)ChemistryAntibioticsMembraneComputational biologyPharmacologyBiochemistryBiologyCell biologyReceptor

Abstract

fetched live from OpenAlex

High Resolution Image Download MS PowerPoint Slide Antimicrobial resistance continues to be a prevailing threat to human health worldwide, largely due to the arsenal of resistance mechanisms bacteria have evolved over years of exposure to traditional antibiotics. As an approach to devising therapeutics that can overcome this resistance, we hypothesized that peptides consisting of single transmembrane (TM) segments of membrane proteins may permeabilize bacterial membranes and thereby facilitate access of antimicrobials to their cytoplasmic targets. Using peptides derived from a natural TM helix from the AcrB component of the AcrAB-TolC efflux protein, we found that AcrB TM8 (wild type sequence: KKKK–FL(Abu)LAALYESWSI–NH 2 ) and a “scrambled” analog of identical composition, charge, and overall hydrophobicity (TM8-S: KKKK–FSLEALW(Abu)ISAYL–NH 2 ) (Abu = α-aminobutyric acid), resensitize Escherichia coli to sublethal doses of the antibiotics cloxacillin and nalidixic acid. These peptides induce 50–100% reduction of cell growth compared to bacteria treated with either peptide or antibiotic alone. The molecular basis for peptide-based permeabilization of the bacterial outer and inner membranes that contributes to the observed antibiotic potentiation was studied through several in vitro liposome-based assays and in vivo fluorescence-based assays. The overall results suggest that membrane proteins harbor a wealth of peptide sequences that may function as effective membrane-active peptides for the targeting of difficult-to-treat Gram-negative bacterial infections, and as such, provide valuable guidelines for the design of membrane-active peptides with synergistic antibacterial and antibiotic potentiation activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.026
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.214
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

Explore more

Same venueACS OmegaSame topicAntimicrobial Peptides and ActivitiesFrench-language works237,207