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Record W4409838805 · doi:10.1101/2025.04.23.650286

Estimating dead fish quantities dropping out of gillnets when direct observations are impossible

2025· preprint· en· W4409838805 on OpenAlexafffundabout
Hugues P. Benoît, Jean-Martin Chamberland, Jacques Allard

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIdentification and Quantification in Food
Canadian institutionsStatistics CanadaFisheries and Oceans Canada
FundersFisheries and Oceans Canada
KeywordsFish <Actinopterygii>FisheryMathematicsStatisticsEconometricsEnvironmental scienceMathematical economicsBiology

Abstract

fetched live from OpenAlex

Abstract Fish that are caught in passive or fixed fishing gear and subsequently die and drop out of the gear, or that are removed by scavengers, do not show up in catch statistics and constitute unaccounted-for removals. Estimating these removals is challenging, particularly when direct observations are not possible because fishing conditions preclude the use of cameras or other devices or means to catch or observe the removals. Using a simple theoretical process model, we define two independent modelling approaches to estimate unaccounted mortalities resulting from drop-out. The first is based on a minimally refined analysis of commonly available fishery catch per unit effort data. The second, models data that can be obtained straightforwardly from field experiments and from at-sea fishery observers, specifically data on catch amounts, and catch composition according to three condition categories – live, dead-fresh and degraded. We apply these modelling approaches to data from the Gulf of St. Lawrence (Canada) Greenland halibut ( Reinhardtius hippoglossoides ) gillnet fishery, for which multi-day soak durations have long been suspected of generating significant unaccounted fish death while only little evidence is available. In fact, observed proportions of dead decaying and ultimately discarded catch for this fishery are small and increase only a little with increased soak duration, constituting seemingly contradictory evidence. The two modelling approaches produce similar results, estimating that total dead catches of Greenland halibut were on average 4.7 to 5.4 times the recorded landings over the period from 2000 to 2024. This result is consistent with the high mortality levels suggested by the assessment for this stock. Of broader relevance to other gillnet fisheries worldwide that may employ shorter soak duration, we found that estimated unobserved catch losses equalled retained catch after soak durations of 15 hours or less. Importantly the condition of fish in catches may belie the quantities of dead fish losses. Failing to account for fishing derived loss of the magnitude estimated here could result in important biases in stock assessments and associated sustainable harvesting frameworks, in addition to constituting an important source of waste.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.063
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.265
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes3
Has abstractyes

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