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Record W4409980925 · doi:10.1002/ajp.70038

Is Primate Cone Ratio Variation Functional and Adaptive?

2025· review· en· W4409980925 on OpenAlexaff
Rachel A. Munds, Amanda Melin, James P. Higham

Bibliographic record

VenueAmerican Journal of Primatology · 2025
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRetinal Development and Disorders
Canadian institutionsAlberta Children's HospitalUniversity of Calgary
Fundersnot available
KeywordsIntraspecific competitionVariation (astronomy)PrimateBiologyEvolutionary biologyAdaptation (eye)Color visionZoologyEcologyNeuroscienceArtificial intelligencePhysicsComputer science

Abstract

fetched live from OpenAlex

Variation in animal perception provides excellent opportunities for studying adaptation. Unusually, primates exhibit a great deal of inter- and intra-specific visual system variation. Here, we discuss what is known about the retinal cone mosaic, and the sources of variation in primate cone types and their relative expression. We focus on catarrhines (African and Asian monkeys and apes and humans), which have evolved uniform trichromacy, exhibiting short- (S), medium- (M), and long-wave (L) cones. Catarrhines generally exhibit high inter-specific consistency in the peak sensitivities of their L and M sensitive cones. One under-explored component of variation is the relative expression of those cones, that is, the L:M ratio. Across catarrhines, the mean L:M ratio is 1:1, with some limited intraspecific variation. Intriguingly, humans show two big differences compared to other catarrhines. Firstly, their mean L:M ratio is shifted to 2:1. Secondly, they show vast (75-fold) intraspecific L:M ratio variation. We discuss evidence as to whether this difference in the mean ratio, and this high intraspecific variation, are likely to have functional consequences, concluding that indeed this variation likely impacts color perception. We finish by suggesting possible explanations for the higher mean ratio of L:M cones in humans, highlighting similarities with other aspects of our color vision that differ from other catarrhines. We hope that the suggestions and questions we raise will inspire future research on primate cone ratios.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.002
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.295
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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