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Record W4410601356 · doi:10.26434/chemrxiv-2025-7lt30

The role of transmembrane proton transport rate in mild mitochondrial uncoupling produced by arylamide substituted fatty acids.

2025· preprint· en· W4410601356 on OpenAlexaff
Ethan Pacchini, Daniel A. McNaughton, Philip A. Gale, Katie A. Wilson, Tristan Rawling

Bibliographic record

VenueChemRxiv · 2025
Typepreprint
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsMemorial University of Newfoundland
Fundersnot available
KeywordsTransmembrane proteinChemistryUncoupling proteinMitochondrionBiochemistryBiophysicsBiologyReceptor

Abstract

fetched live from OpenAlex

Mitochondrial uncoupling by small molecule protonophores is a promising therapeutic strategy for treatment of cancer and other diseases, however the toxicity associated with uncoupling is a major challenge. A possible solution is the development of mild uncouplers that partially depolarise mitochondria without affecting ATP production. In this study, we prepared a series arylamide substituted fatty acid protonophores and demonstrate that arylamides with appropriate aromatic substitution patterns produce mild uncoupling. Specifically, 3,4-substituted arylamides increased respiration in MDA-MB-231 breast cancer cells and partially collapsed mitochondrial proton gradients without affecting ATP production or cell viability. In contrast, the actions of 3,5-substituted arylamides were similar to those of known full uncouplers DNP and CCCP and decreased intracellular ATP levels. Using a vesicle-based proton transport assay, we found that the rates of transmembrane proton transport by the 3,4-substituted arylamides were slower than those of their 3,5-substituted counterparts, which is attributed to a diminished capacity of 3,4-substituted arylamides to form membrane permeable dimers in the rate limiting step of the protonophoric cycle. This is the first study to assess the role of proton transport rate in protonophore-mediated mitochondrial uncoupling, and the results indicate that development of protonophores with limited proton transport rates may be a viable strategy towards identifying mild uncouplers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.000
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.265
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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