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TYPE I INTERFERON GENES SIGNATURE AND GALECTINS-1,3,9: ARE THERE A RELATIONSHIPS?

2025· article· en· W4410715562 on OpenAlexvenueno aff
Liubov Kondrateva, T. A. Panafidina, Yulia Gorbunova, Elena V. Tchetina, А. С. Авдеева, Т. В. Попкова

Bibliographic record

VenueThe Journal of Rheumatology · 2025
Typearticle
Languageen
FieldImmunology and Microbiology
TopicGalectins and Cancer Biology
Canadian institutionsnot available
Fundersnot available
KeywordsMedicineGalectinGeneSignature (topology)InterferonGene signatureInterferon type IGeneticsImmunologyComputational biologyGene expressionBiology

Abstract

fetched live from OpenAlex

PV032 / #459 Poster Topic: AS04 - Biomarkers Background/Purpose To find out whether galectins-1,3,9 levels are related to the type I interferon genes signature (IFNGS) in patients with systemic lupus erythematosus (SLE). Methods A total of 43 patients (38 women and 5 men) with SLE (31[23-41] years old) were enrolled in the study. The median SLE duration was 24 [1-96] months, SLEDAI-2K was 8 [4-14]. SLE pts were treated with glucocorticoids (GC) (72,12%), hydroxychloroquine (69,8%), immunosuppressive drugs (35,9%) and biological agents (4,7%). Type I interferon status was assessed as «low» or «high» by the average expression of interferon-inducible 3 selected genes (MX1, RSAD2, EPSTI1) using real-time polymerase chain reaction. IFNGS was considered «high» if the average genes expression value in patients exceeded that in donors (20 healthy donors comparable in sex and age with the SLE patients). Serum galectins-1,3,9 levels were determined by enzyme—linked immunosorbent assay (Cloud-Clone Corp., China). Results «High» IFNGS was detected in 33 of 43 patients with SLE. Patients with «high» and «low» INFGS did not differ in age, gender, disease duration, SLE activity according to SLEDAI-2K (p>0,05 for all). Galectins-1 and 3 levels were comparable in patients with «high» and «low» IFNGS, but the galectin-9 levels were higher in patients with elevated gene expression (Table 1). Table 1. Galectins levels depending on IFNGS status in patients with SLE Conclusions The serum concentrations of galectin-9, but not galectins-1 and 3, depend on interferon-inducible genes expression in SLE patients. Increased galectin-9 may be a surrogate serological biomarker of elevated type I interferon status.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.281
Threshold uncertainty score0.332

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.247
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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