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Record W4410742553 · doi:10.1101/2025.05.21.655269

The synovial lining macrophage layer develops in the first weeks of life in a CSF1- and TGFβ-dependent but monocyte-independent process

2025· preprint· en· W4410742553 on OpenAlexaff
Marlene Magalhaes Pinto, Bert Malengier‐Devlies, Guillaume Seuzaret, Anna Ahlback, Solvig Becker, Katelyn Patatsos, Georgios Drakoulis, Christiane Ruedl, David Voehringer, Calum C. Bain, Elaine Emmerson, Barbora Schonfeldova, Kristina Zec, Irina A. Udalova, Theodoros Simakou, Lucy MacDonald, Mariola Kurowska‐Stolarska, J. Zarebska, Tonia L. Vincent, Roméo Ricci, Eric Erbs, Jack Barrington, Barry W. McColl, Georgiana Neag, Samuel Kemble, Christopher B. Mahony, Adam P. Croft, Louis Boon, Nicole Migotsky, Megan L. Killian, Oumaima Ben Brahim, Stefan Uderhardt, Alexandre Gallerand, Stoyan Ivanov, Rebecca Gentek

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsInstitute of Infection and Immunity
FundersUK Dementia Research InstituteInstitut National de la Santé et de la Recherche MédicaleAgence Nationale de la RechercheDeutsche ForschungsgemeinschaftMedical Research CouncilRoyal SocietyKennedy Trust for Rheumatology ResearchWellcome Trust
KeywordsMonocyteMacrophageTransforming growth factorLayer (electronics)Process (computing)Cell biologyImmunologyMedicineMaterials scienceChemistryBiologyComputer scienceNanotechnologyBiochemistry

Abstract

fetched live from OpenAlex

Summary Synovial joints harbor a protective lining layer, consisting of fibroblasts and macrophages, which form an epithelial-like barrier. In inflamed joints, lining macrophages regulate both early inflammatory cell influx and resolution. Despite these critical functions, it is currently unknown at what stage during development the synovial macrophage lining is established, and which signals drive this process. Here, we use a combination of genetic models and in vivo perturbations, single cell transcriptomics and imaging to delineate the process of lining formation in mice. We find that the synovial lining is immature at birth and becomes established within the first 3 weeks of life. In this window, the lining is gradually populated with macrophages that originate from fetal sources, proliferate and acquire the lining-specific transcriptional identity. In contrast, monocytes contribute only minimally to the developing lining, and their input remains limited in healthy adulthood. We identify CSF1 and TGFβ as key signals in this process, which also involves mechanosensing through PIEZO1. Our study thus identifies the early postnatal window as a critical period for lining macrophage development, with potential lifelong impact on joint health and disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.237
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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Same venuebioRxiv (Cold Spring Harbor Laboratory)Same topicImmune cells in cancerFrench-language works237,207