Fungal diversity notes 1919–2016: taxonomic and phylogenetic contributions to fungal taxa
Bibliographic record
Abstract
This article is the 18th contribution to the Fungal Diversity Notes series, in which we document 98 taxa across two phyla, eight classes, 21 orders, 46 families, and 59 genera. The represent samples of taxa were collected from a diverse range of regions, including Australia, Benin, Bolivia, Burkina Faso, Cameroon, Canada, China, Czechia, India, Japan, Madagascar, Mexico, New Zealand, Sri Lanka, Thailand, Togo, USA, Uzbekistan and Venezuela. Among these, we introduce one new genus, 59 new species, 13 new combinations, one new name and 24 new records, along with information on their hosts and geographic distributions. The newly introduced genus is Fusicastoreum, and the newly described species include: Acrogenospora guangxiensis, Agaricus longistipitatus, A. sunanensis, Anthosulcatispora sichuanensis, Anthracoidea siccatae, Bjerkandera meridionalis, Camarophyllopsis brunnea, Candolleomyces analalavaensis, C. kely, C. macrosporus, Ceriporia yunnanensis, Choiromyces mongolicus, Colletotrichum duohuaense, Coprinus variicolor, Cystoderma alticola, C. microspore, C. yadongense, Cytospora lhaluensis, Diaporthe amberina, D. mangiferae, Elsinoe fuzhouensis, Epicocum maxima, Fulvifomes shailashikhara, Fusarium tuberculatum, Fusicastoreum arenarium, F. occidentale, F. pisiglareum, F. trappei, Gyalidea lluxitensis, Gymnopilus rimopileus, Hohenbuehelia triloba, Hymenagaricus ruber, Hypholoma darjeelingensis, Laccaria guizhouensis, Lactifluus aureoelephanti, L. croceivillus, Leucoagaricus ankarafantsikaensis, L. rutilus, Micropsalliota squamulosa, M. vinacea, Neomyrmecridium triseptatum, Niesslia wurfbainiae, Nigropunctata conspicosa, Ophiocordyceps jilinensis, Oxydothis dehongensis, Panaeolus ranwuensis, Pestalotiopsis buxicola, Pleurocordyceps puerensis, Pseudocercospora cunninghamia, Psilocybe zhushanensis, Remotididymella tachibana, Russula gaoligongensis, R. guilinensis, R. pseudovirescens, Sarocladium solani, Septoriella saviya-ramazanovaii, Seriascoma oblonga, Talaromyces pseudorugulosus and Tricholosporum madagascariense. Additionally, species newly transferred from Psilocybe include Deconica caespitosa, D. californica, D. goniospora, D. josecastilloi, D. latispora, D. novozoncuantlensis, D. oregonensis, D. venezuelana and D. vialis. Russula afroscrobiculata is newly transferred from Lactarius afroscrobiculatus, and Puccinia hamamelidis, P. hydrangeicola, P. philadelphi are newly transferred from Aecidium. Furthermore, the new name Puccinia shojiana is proposed as a replacement for Aecidium akebiae. The 24 new records of hosts and geographical distributions include: Agaricus pallidobrunneus, Bovista cretacea, Candolleomyces subsingeri, Clitopilus chichawatniensis, Collybiopsis gibbosa, C. subumbilicata, Curvularia geniculate, Cystoderma japonicum, Cytospora diatrypelloidea, C. schulzeri, Elsinoe leucospermi, Fulvifomes aurantiacus, Laccaria macrobasidia, Menisporopsis pandanicola, M. pirozynskii, Multifurca pseudofurcata, Musicillium elettariae, Myrmecridium pulvericola, Ophiocordyceps asiana, O. campes, Phellinus resupinatus, Phylloporia afrospathulata, Tropicoporus linteus and Typhula incarnate. All taxa are supported by both morphological and phylogenetic analyses.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.004 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.012 | 0.013 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.002 | 0.002 |
| Open science | 0.000 | 0.003 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.010 | 0.003 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".