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Record W4410846663 · doi:10.1007/s13225-025-00556-z

Fungal diversity notes 1919–2016: taxonomic and phylogenetic contributions to fungal taxa

2025· article· en· W4410846663 on OpenAlexaffabout
Bin Cao, Dorji Phurbu, Anna B. Ralaiveloarisoa, Kare Liimatainen, Tuula Niskanen, Virginia Ramírez-Cruz, Alexander J. Bradshaw, Bryn T. M. Dentinger, Florencia Ramírez-Guillén, Alonso Cortés-Pérez, Laura Guzmán‐Dávalos, Alma Rosa Villalobos-Arámbula, Oscar Castro-Jauregui, Paula Santos da Silva, Naveed Davoodian, Teresa Lebel, Michael A. Castellano, Tom W. May, Merje Toome, Jack Vasey, Katharina Höfer, M. Braithwaite, Lewis Braithwaite, Arun Kumar Dutta, Pinaki Chattopadhyay, Niranjan Roy, Bhaben Tanti, Pinky Rani Biswas, Elangovan Arumugam, Kezhocuyi Kezo, Malarvizhi Kaliyaperumal, Ramesh Murugadoss, Jing‐Xin Ji, Makoto Kakishima, Jerry Cooper, Jorinde Nuytinck, Zong-Long Luo, Wenpeng Wang, Xian Zhang, Ting‐Chi Wen, Xinlei Fan, Ning Jiang, Ning Jiao, Ying Zhang, Ishara S. Manawasinghe, Hua Li, Yin-Ru Xiong, Tao Zhou, Tamotsu Hoshino, Phaedra Lagaet, R. D. Lange, Annemieke Verbeken, Lowie Tondeleir, Cathrin Manz, Felix Hampe, Chang-Lin Zhao, Yang Yang, Guiqing Zhang, Dong-Qin Dai, Michal Tomšovský, Teodor T. Denchev, Cvetomir M. Denchev, Étienne Léveillé‐Bourret, Martin Kemler, Yanpeng Chen, Sajeewa S. N. Maharachchikumbura, Zixuan Feng, Long Wang, Qiming Wang, Shanping Wan, Fuqiang Yu, Jian‐Kui Liu, Hongzhi Du, Na Wu, Hongli Hu, Jian Su, Zonghua Wang, Yanping Hu, Hao Yu, Jing Wang, Yihua Yang, Wei Dong, Yongxin Shu, Haijun Zhao, Chao-Qun Wang, Chun-Fang Liao, Mingkwan Doilom, Guojie Li, Nakarin Suwannarach, Chanokned Senwanna, Yusufjon Gafforov, Adam Flakus, Tomasz Suchan, Óscar Plata, Pamela Rodriguez‐Flakus, Juna Tamang, Krishnendu Acharya, Hongde Yang, Ruvishika S. Jayawardena, Assiata Tiendrebeogo, Cony Decock, Irénée Somda, Anne Legrève, Yang Yu, Yuan-Pin Xiao, Jiaxin Li, Naritsada Thongklang, Xi-Xi Han, Wen-Qiang Yang, Shihui Wang, Mao-Qiang He, Kevin D. Hyde, Rui-Lin Zhao

Bibliographic record

VenueFungal Diversity · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversité de MontréalUniversité du Québec à Montréal
FundersNational Natural Science Foundation of China
KeywordsTaxonBiologyFungal DiversityMycologyPhylogenetic treePhylogenetic diversityBiodiversityEcologyPhylogeneticsTaxonomy (biology)ZoologyDiversity (politics)Evolutionary biologyBotanyAnthropologyGenetics

Abstract

fetched live from OpenAlex

This article is the 18th contribution to the Fungal Diversity Notes series, in which we document 98 taxa across two phyla, eight classes, 21 orders, 46 families, and 59 genera. The represent samples of taxa were collected from a diverse range of regions, including Australia, Benin, Bolivia, Burkina Faso, Cameroon, Canada, China, Czechia, India, Japan, Madagascar, Mexico, New Zealand, Sri Lanka, Thailand, Togo, USA, Uzbekistan and Venezuela. Among these, we introduce one new genus, 59 new species, 13 new combinations, one new name and 24 new records, along with information on their hosts and geographic distributions. The newly introduced genus is Fusicastoreum, and the newly described species include: Acrogenospora guangxiensis, Agaricus longistipitatus, A. sunanensis, Anthosulcatispora sichuanensis, Anthracoidea siccatae, Bjerkandera meridionalis, Camarophyllopsis brunnea, Candolleomyces analalavaensis, C. kely, C. macrosporus, Ceriporia yunnanensis, Choiromyces mongolicus, Colletotrichum duohuaense, Coprinus variicolor, Cystoderma alticola, C. microspore, C. yadongense, Cytospora lhaluensis, Diaporthe amberina, D. mangiferae, Elsinoe fuzhouensis, Epicocum maxima, Fulvifomes shailashikhara, Fusarium tuberculatum, Fusicastoreum arenarium, F. occidentale, F. pisiglareum, F. trappei, Gyalidea lluxitensis, Gymnopilus rimopileus, Hohenbuehelia triloba, Hymenagaricus ruber, Hypholoma darjeelingensis, Laccaria guizhouensis, Lactifluus aureoelephanti, L. croceivillus, Leucoagaricus ankarafantsikaensis, L. rutilus, Micropsalliota squamulosa, M. vinacea, Neomyrmecridium triseptatum, Niesslia wurfbainiae, Nigropunctata conspicosa, Ophiocordyceps jilinensis, Oxydothis dehongensis, Panaeolus ranwuensis, Pestalotiopsis buxicola, Pleurocordyceps puerensis, Pseudocercospora cunninghamia, Psilocybe zhushanensis, Remotididymella tachibana, Russula gaoligongensis, R. guilinensis, R. pseudovirescens, Sarocladium solani, Septoriella saviya-ramazanovaii, Seriascoma oblonga, Talaromyces pseudorugulosus and Tricholosporum madagascariense. Additionally, species newly transferred from Psilocybe include Deconica caespitosa, D. californica, D. goniospora, D. josecastilloi, D. latispora, D. novozoncuantlensis, D. oregonensis, D. venezuelana and D. vialis. Russula afroscrobiculata is newly transferred from Lactarius afroscrobiculatus, and Puccinia hamamelidis, P. hydrangeicola, P. philadelphi are newly transferred from Aecidium. Furthermore, the new name Puccinia shojiana is proposed as a replacement for Aecidium akebiae. The 24 new records of hosts and geographical distributions include: Agaricus pallidobrunneus, Bovista cretacea, Candolleomyces subsingeri, Clitopilus chichawatniensis, Collybiopsis gibbosa, C. subumbilicata, Curvularia geniculate, Cystoderma japonicum, Cytospora diatrypelloidea, C. schulzeri, Elsinoe leucospermi, Fulvifomes aurantiacus, Laccaria macrobasidia, Menisporopsis pandanicola, M. pirozynskii, Multifurca pseudofurcata, Musicillium elettariae, Myrmecridium pulvericola, Ophiocordyceps asiana, O. campes, Phellinus resupinatus, Phylloporia afrospathulata, Tropicoporus linteus and Typhula incarnate. All taxa are supported by both morphological and phylogenetic analyses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.034

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0120.013
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0000.003
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0100.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.231
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations15
Published2025
Admission routes2
Has abstractyes

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