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Record W4411197975 · doi:10.1139/cjm-2024-0211

Isolation, identification, and community study of root fungal isolates from disturbed and undisturbed Arctic and alpine tundra habitats in Northern Quebec, Canada

2025· article· en· W4411197975 on OpenAlexafffundvenueabout
Godar Sene, Marie-Ève Beaulieu, Stéphane Boudreau, Damase P. Khasa

Bibliographic record

VenueCanadian Journal of Microbiology · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversité Laval
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsTundraArcticHabitatIsolation (microbiology)EcologyBiologyIdentification (biology)The arcticGeographyBotanyMicrobiology

Abstract

fetched live from OpenAlex

In northern ecosystems such as the subarctic tundra, mining activities increase stress to a point where actions are needed to promote site reclamation. Ecological restoration of these mining-impacted sites with beneficial microorganisms, such as mycorrhizal fungi, is considered necessary and useful for the growth and survival of their host plants, but also for their tolerance to poor and contaminated environments, such as mine tailings. Here, we are interested in root symbionts associated with plants from the Schefferville mining site in northern Quebec. Very few studies of root fungal communities have been conducted in such a northern environment. The spatial and host plant variation of root fungal isolates was investigated. A total of 456 culturable fungi were isolated, of which 376 were successfully identified and assigned to 106 taxa based on rDNA internal transcribed spacer analysis using ITSF-1 and ITS-4 primers. The most commonly isolated fungi belonged to three genetically related groups: the Rhizoscyphus ericae aggregate, the dark septate endophytes, and Umbelopsis rammaniana and Mortierella sp., which are known to be genetically very close and often misclassified as one another. These groups were present on both disturbed and natural sites, but it appears that plants from disturbed sites had a greater affinity for dark septate endophytes. This study is the first step in the development of a restoration plan for the Schefferville mining site, and the baseline data obtained open new avenues for future studies, including the use of indigenous mycorrhizal-based biofertilizers to implement ecological revegetation strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.054
Threshold uncertainty score0.108

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.002
Science and technology studies0.0020.001
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.201
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes4
Has abstractyes

Explore more

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