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Record W4411612137 · doi:10.3934/molsci.2025012

The master energy sensor AMPK-1α regulates the expression of various autophagic and mitochondrial respiratory elements in T cell memory

2025· article· en· W4411612137 on OpenAlexaff
Michelle Yu, Zhaojia Wu, Scot C. Leary, Jim Xiang

Bibliographic record

VenueAIMS molecular science · 2025
Typearticle
Languageen
FieldMedicine
TopicAutophagy in Disease and Therapy
Canadian institutionsSaskatchewan Cancer AgencyUniversity of Saskatchewan
Fundersnot available
KeywordsAutophagyAMPKCell biologyMitochondrionCellChemistryBiologyApoptosisBiochemistryProtein kinase A

Abstract

fetched live from OpenAlex

AMPK-1α is a master energy sensor that phosphorylates more than 100 client proteins involved in almost all branches of cellular metabolism. We recently demonstrated that weak mTORC1 (mTORC1Weak) signaling promotes the differentiation of pro-survival cytokine IL-7- or IL-15-stimulated CD8+ memory T (IL-7/TM and IL-15/TM) cells derived from ovalbumin (OVA)-specific T-cell receptor transgenic OTI mice by upregulating the expression of AMPK-1α and another twelve autophagic and metabolic regulators, including ULK1, ATG7, LC3II, SIRT1, PGC1α, CPT1α, AQP9, Complex I, LAL, OPA1, Bcl6, and TFAM. To investigate the potential role of AMPK-1α in controlling the abundance of these proteins, we genetically engineered AMPK knockout (KO)/OTI mice, and then prepared and subjected IL-7/TM or IL-15/TM cells from these animals to western blot analyses. Interestingly, we found that their steady-state levels were all significantly down-regulated in both IL-7/TM and IL-15/TM cells upon the loss of AMPK-1α expression. Thus, our data suggest that AMPK-1α indeed regulates these 12 downstream targets, a possibility that is further substantiated by the fact that a modern chemical genetic screen previously identified ULK1, ATG7, LC3II, SERT1, and PGC1α as AMPK-1α substrates. Taken together, our data establishes that the master energy sensor AMPK-1α controls the expression of seven additional regulatory markers, which are all critical to cellular metabolism and whose identification may impact the development of AMPK-1α-targeted therapeutics for treating metabolic disorders and cancer diseases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.254

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.252
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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