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Record W4411642896 · doi:10.1101/2025.06.19.660638

Spectral imprint of structural embedding in effective connectivity

2025· preprint· en· W4411642896 on OpenAlexafffund
Matthew D. Greaves, Leonardo Novelli, James C. Pang, Alex Fornito, Adeel Razi

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsCanadian Institute for Advanced Research
FundersNational Health and Medical Research CouncilAustralian GovernmentMcDonnell Center for Systems NeuroscienceNational Institutes of HealthMedical Research CouncilCanadian Institute for Advanced Research
KeywordsEmbeddingStatistical physicsChromatic scaleMultifractal systemComputer scienceAttractorPhysicsBiological systemMathematicsArtificial intelligenceFractalMathematical analysisBiologyOptics

Abstract

fetched live from OpenAlex

Neural fluctuations exhibit rich spectral profiles that reflects both local dynamics and structural (or anatomical) embedding. Yet, standard models of resting-state effective connectivity neglect structural embedding and assume uniformity in the timescales of regions' endogenous fluctuations. We introduce a chromatic dynamic causal model (DCM) in which structural valency (or degree) modulates the spectral 'color' of endogenous fluctuations. Specifically, we assume a linear mapping between regional structural valency and the spectral exponent of scale-free auto-spectra. Simulations show this mapping can emerge as a generic consequence of structural embedding under minimal coupling in a non-equilibrium regime. We show chromatic DCM reliably recovers ground-truth parameters across network sizes and noise conditions, outperforming standard spectral DCM. Applied to empirical data, chromatic DCM reveals that valency-exponent mappings vary across a cortical hierarchy, and that its parameters are conserved across a homologous network in humans, macaques, marmosets, and mice. These findings advance a generative account of structure-function coupling and expand the repertoire of biophysical mechanisms available for inference in effective connectivity modeling.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.002
Scholarly communication0.0010.002
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.259
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

Explore more

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