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Record W4412005595 · doi:10.1016/j.jconhyd.2025.104631

Diffusive transport properties of seawater in calcite nanopores: A molecular dynamics study

2025· article· en· W4412005595 on OpenAlexafffund
Juan C. Burgos, Sergio Bustamante, José Antonio Fernández Avilés, Édgar Quiñones-Bolaños, Mehrab Mehrvar

Bibliographic record

VenueJournal of Contaminant Hydrology · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicGroundwater flow and contamination studies
Canadian institutionsUniversity of Toronto
FundersUniversidad de CartagenaQueen Elizabeth Diamond Jubilee TrustToronto Metropolitan University
KeywordsCalciteSeawaterThermal diffusivityDiffusionMolecular dynamicsChemical physicsChemistryIonic bondingElectrolyteMineralogyThermodynamicsIonGeologyPhysical chemistryComputational chemistryPhysics

Abstract

fetched live from OpenAlex

Classical molecular dynamics (MD) simulations were used to explore the diffusive transport properties of seawater through porous media of different calcite structures. Two different calcite surfaces constituted the pore slit models with a size of 1.5 nm; seawater with a 3.5 wt% of salinity occupied the free volume between calcite surfaces at the corresponding average seawater density. The SPC/E water model was employed to describe the water molecules’ interactions, while a Buckingham-type potential modeled the calcite. All cross-interactions were modeled using the Lennard-Jones potential and Ewald sums electrostatics. The simulations demonstrated that calcite surfaces reduce the diffusivity of Na + and Cl - ions, and the magnitude of the diffusivity reduction depends on the structure of the calcite surface. The topology and charge distribution features of the energetically most stable calcite (104) surface led to a slight reduction in the electrolyte diffusivity. On the contrary, density profiles evidenced that the least stable calcite surface (100) favored preferential adsorption of Na + , leading to significant differences in ionic diffusion coefficients. Finally, the ionic-specific diffusion coefficients obtained from molecular dynamics simulations were loaded into an advection–dispersion model to simulate a seawater intrusion into coastal aquifers scenario, with parameters associated with a predominantly diffusive transport through the most stable calcite pore. The concentration profiles showed that minor differences between Na + and Cl - diffusivities result in Na + /Cl - concentration disparities a few meters away from the coastline after years of seawater shifting the dispersion zone.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.219
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2025
Admission routes2
Has abstractno

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