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Record W4412036738 · doi:10.21750/refor.19.03.124

Lethals can be estimated from doubled haploid <i>Larix decidua </i>female gametophytes

2024· article· en· W4412036738 on OpenAlexaff
Claire G. Williams, Patrick von Aderkas

Bibliographic record

VenueREFORESTA · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsUniversity of Victoria
Fundersnot available
KeywordsGametophyteBiologyDeciduaPloidyBotanyAnimal scienceAndrologyGeneticsPollenMedicineGenePregnancy

Abstract

fetched live from OpenAlex

<jats:p>We present a novel way of estimating embryo lethals using doubled haploid (dihaploid or DH) female gametophytes grown in tissue culture. This DH-based lethals estimate is hypothesized to be lower than the more common method where lethals are estimated from one generation of selfing. The chief reasoning is the early mortality spike observed for selfed embryos of larch and other genera in the Pinaceae. This early mortality spike occurs at the stage when diploid embryos embed into haploid female gametophyte tissue. However, this stage is missing for DH embryos which grow in a petri dish thus the DH lethals estimate is hypothesized to be lower compared to seed counts. This DH estimate is based on 20,000 haploid female gametophytes cultures from which two surviving diploidized embryos were recovered. Lethals based on diploidized haploids (DH) have not been reported for a conifer previously because, aside from larch, only a few conifer species continue female gametophyte development in absence of pollen. Our chief finding is that, contrary to our hypothesis, the DH-based lethals estimate was similar to lethals estimated obtained from selfed seeds in published studies. Thus doubling haploid female gametophytes can be used to estimate embryo lethals when diploidization is conducted on a massive scale.</jats:p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.494
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0060.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.292
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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Same venueREFORESTASame topicEcology and Vegetation Dynamics StudiesFrench-language works237,207