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Record W4412141372 · doi:10.1002/ppj2.70032

Differences in apple fruit shape are independent of fruit size

2025· article· en· W4412141372 on OpenAlexafffundabout
Kylie DeViller, Daniel H. Chitwood, Sean Myles, Mao Li, Zoë Migicovsky

Bibliographic record

VenueThe Plant Phenome Journal · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Physiology and Cultivation Studies
Canadian institutionsDalhousie UniversityAcadia University
FundersDivision of Integrative Organismal SystemsCanada Research Chairs
KeywordsHorticultureMathematicsBiology

Abstract

fetched live from OpenAlex

Abstract Fruit quality is crucial in breeding new apple varieties. Before tasting, consumers assess freshness and flavor based on the physical appearance of fruit. Understanding how fruit quality traits such as shape and size vary across diverse apples [ Malus domestica (Suckow) Borkh.] provides a foundation for future breeding efforts. We analyzed images of 5724 apples representing 743 different trees and 534 unique accessions from Canada's Apple Biodiversity Collection to quantify variation in fruit shape and size. To achieve this, we used a pseudo‐landmarking approach paired with traditional linear measurements including length, width, area, solidity, circularity, and aspect ratio. We also incorporated previously collected fruit weight measurements from the same trees. Using a comprehensive measure of shape, we determined that the primary source of variation in apple fruit shape, or morphometric principal component 1 (PC1) which explained 22.7% of the variation, was most highly correlated with the width to length (aspect) ratio of the fruit ( ρ = −0.964, p < 1 × 10 −15 ). In contrast, PC1 was not significantly correlated with differences in fruit size as measured using area and harvest weight. Our findings indicate that two critical aspects of morphological variation in apple—fruit shape and size—are independent, suggesting it is possible to select for a diverse range of fruit shapes while maintaining a consistent and marketable size.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.402
Threshold uncertainty score0.333

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.222
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes3
Has abstractyes

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