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Record W4412392073 · doi:10.1016/j.cbpb.2025.111122

Developmental exposure to constant elevated temperatures and diel thermal variation alters microRNA expression and performance in zebrafish (Danio rerio).

2025· article· en· W4412392073 on OpenAlexafffund
Sana Gavarikar, Paul M. Craig

Bibliographic record

VenueComparative Biochemistry and Physiology Part B Biochemistry and Molecular Biology · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicPhysiological and biochemical adaptations
Canadian institutionsUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of CanadaCanada Foundation for Innovation
KeywordsZebrafishDanioBiologyDiel vertical migrationHeat shock proteinHeat shockJuvenile fishEpigeneticsmicroRNAJuvenileCell biologyEcologyGenetics

Abstract

fetched live from OpenAlex

In their natural environments, fish are exposed to diel thermal fluctuations, the range of which is expected to increase dramatically with climate change. Recently, it has been posited that epigenetic modulators like microRNAs (miRNAs) could buffer fish against such changes. To investigate this, we conducted two sequential experiments using zebrafish ( Danio rerio ). In Experiment 1, we exposed zebrafish to constant control (CTRL; 28 °C), fluctuating (FLUX; 28 ± 5 °C), or elevated (HEAT; 33 °C) temperatures throughout early development (embryo to juvenile, up to 30 days post-fertilization [dpf]). Throughout early development, we assessed survival, metabolism, and the expression of seven thermosensitive miRNAs and three heat shock proteins (HSPs). While HEAT conditions significantly reduced survival, FLUX exposure did not. Both FLUX and HEAT juveniles exhibited metabolic compensation, though this was more pronounced in FLUX fish. Notably, miR-181a-5p, which regulates mitochondrial biogenesis and respiration, was significantly upregulated in FLUX juveniles, suggesting its involvement in improving metabolic performance. Experiment 2 evaluated the long-term effects of ontogenetic thermal variability. Starting at 30 dpf, remaining fish in both CTRL and FLUX treatments were maintained under CTRL conditions until adulthood. We then assessed miRNA expression in the brain and thermal tolerance (CT max ). miR-181a-5p remained elevated in the brains of adult fish with FLUX developmental histories, though CT max was unaffected. Together, these findings suggest that early-life exposure to diel thermal fluctuations induces lasting epigenetic changes, potentially optimizing metabolic performance in the short-term at the cost of reduced capacity for further thermal tolerance and stress recovery later in life.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.238
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes2
Has abstractyes

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