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Record W4412507577 · doi:10.1016/j.bbrep.2025.102160

Alkaline phosphatase–streptavidin conjugate (APSA) enzyme and binding activity over time and storage conditions

2025· article· en· W4412507577 on OpenAlexafffund
Nan Cheng, Lloyd Johnson, Jaimie Dufresne, Sina Atrin Mazinani, John Marshall

Bibliographic record

VenueBiochemistry and Biophysics Reports · 2025
Typearticle
Languageen
FieldMedicine
TopicAlkaline Phosphatase Research Studies
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsConjugateStreptavidinAlkaline phosphataseEnzymeChemistryBiochemistryEnzyme assayBiologyMathematicsBiotin

Abstract

fetched live from OpenAlex

Alkaline phosphatase (AP) linked to streptavidin (SA) in the form of the APSA enzyme conjugate is required for diagnostic screening for a variety of clinical conditions world wide. The enzyme activity of APSA conjugates in the liquid phase showed variation across samples that declined with storage time. Random sampling of the enzyme activity in the liquid phase (ANOVA p < 2E-16; Regression p < 0.043) and the binding plus enzyme activity of APSA in the model assay (R 2 > 0.99) of biotinylated human IgG (B-h-IgG) directly adsorbed to 96 well plates showed a similar loss of function over time (ANOVA p < 9.15E-15, Regression p <1.1E-9). The enzyme AP showed little dissociation from the SA moiety while proteolysis of the BSA carrier was observed. Covalent protease inhibitors 4-(2-aminoethyl)benzenesulfonyl fluoride hydrochloride (AEBSF) or tosyl- l -lysine chloromethyl ketone hydrochloride (TLCK) abrogated AP enzyme activity, but the competitive inhibitors epsilon-aminocaproic acid (EACA) and benzamidine (BNZ) had no protective effect on APSA activity over time. Samples of APSA showed large variation in enzyme activity (p ≤ 2E-16) and so were titrated by the colorimetric assay and standardized against indigo blue in DMSO to achieve an initial OD value of ∼1.0 at 595 nm prior to following activity over storage time. After titration, the effect of temperature, addition of glycerol prior to freezing, and freeze drying with or without trehalose and sucrose, on alkaline phosphatase activity was compared using a sampling schedule over storage time. The alkaline phosphate activity was not immediately sensitive to freeze-drying but was sensitive to storage time and ultra-low temperatures, but the addition of sugars or glycerol to the APSA prevented some of the activity loss. Storage of APSA on wet ice or in 50 % glycerol at −20 °C retained about 50 % of the starting optical density reading of APSA after 170 days in storage.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.899

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.300
Teacher spread0.289 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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